RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 INSCQ1MX18 579 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ANKS6Q68DC2 871 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 TIPARPQ7Z3E1 657 aaKnown RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ARHGAP22Q7Z5H3 698 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 TRAPPC5Q8IUR0 188 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 KLHDC8BQ8IXV7 354 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 PIANPQ8IYJ0 282 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 UNC5BQ8IZJ1 945 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 EXD3Q8N9H8 876 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 LMNTD1Q8N9Z9 388 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 OR6C4Q8NGE1 309 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 GDAP1Q8TB36 358 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 TTC9Q92623 222 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 DNAJC1Q96KC8 554 aaKnown RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF778Q96MU6 729 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 TMEM74Q96NL1 305 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 SLC38A3Q99624 504 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 KCTD5Q9NXV2 234 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 SLC2A6Q9UGQ3 507 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 PRSS21Q9Y6M0 314 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 TLN1Q9Y490 2541 aaKnown RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 RELNP78509 3460 aa9.46□□□□□ -0.89
SSBP3-215ENST00000533946 GLYATL1P3A0A0U1RQE8 302 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 EFCAB7A8K855 629 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 PDZK1P1A8MUH7 402 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 PRAMEF1O95521 474 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 NFKBIAP25963 317 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SPAM1P38567 509 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 GPR3P46089 330 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SEPHS1P49903 392 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 GEMP55040 296 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SQSTM1Q13501 440 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 GPR18Q14330 331 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 OASLQ15646 514 aaKnown RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 LINC00303Q3SY05 128 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 FNBP1LQ5T0N5 605 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 TMEM71Q6P5X7 295 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 BZW1Q7L1Q6 419 aaKnown RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 GPR155Q7Z3F1 870 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 PHYKPLQ8IUZ5 450 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 CDKL3Q8IVW4 592 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 LSMEM2Q8N112 164 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 OR4D9Q8NGE8 314 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 ZNF398Q8TD17 642 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 VPS35Q96QK1 796 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 TBL1YQ9BQ87 522 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SPRY4Q9C004 299 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 STRADBQ9C0K7 418 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 AKIRIN1Q9H9L7 192 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SARS2Q9NP81 518 aaKnown RBP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 LZTFL1Q9NQ48 299 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SMARCAL1Q9NZC9 954 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 TRHDEQ9UKU6 1024 aa9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.46□□□□□ -0.9
SSBP3-215ENST00000533946 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 C5orf60A6NFR6 353 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 KMOO15229 486 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 STX7O15400 261 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 SNRNP200O75643 2136 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 SRP72O76094 671 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TIAF1O95411 115 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 PYGLP06737 847 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 POLBP06746 335 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 HLA-DPA1P20036 260 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 F8A1P23610 371 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 PDHA2P29803 388 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 CXCR5P32302 372 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 KCNJ1P48048 391 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 CLCNKAP51800 687 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TERF1P54274 439 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 NFKB2Q00653 900 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 KIF5AQ12840 1032 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 BIRC2Q13490 618 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 LRP8Q14114 963 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 SEMA3AQ14563 771 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 KCNAB1Q14722 419 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 POU6F1Q14863 301 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 RPE65Q16518 533 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 ZNF658BQ4V348 819 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 COLEC12Q5KU26 742 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 ATP1A1-AS1Q5TC04 95 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 CCDC70Q6NSX1 233 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 ABRAXAS1Q6UWZ7 409 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 FAM92BQ6ZTR7 304 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TMEM26Q6ZUK4 368 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 FAM129CQ86XR2 697 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TMEM151BQ8IW70 566 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 RAVER1Q8IY67 606 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 CLDN19Q8N6F1 224 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 DDHD1Q8NEL9 900 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 OR52K1Q8NGK4 314 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 WDR48Q8TAF3 677 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 NKD1Q969G9 470 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms