RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 RPL3P39023 403 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 AFF1P51825 1210 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 PTGES3Q15185 160 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 VWA5B1Q5TIE3 1220 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 MON1AQ86VX9 555 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 PHC2Q8IXK0 858 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 PHF10Q8WUB8 498 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 ZSCAN5AQ9BUG6 496 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 COL20A1Q9P218 1284 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 MAGEL2Q9UJ55 1249 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 NOCTQ9UK39 431 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 MAFBQ9Y5Q3 323 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 AGPSO00116 658 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 IPO13O94829 963 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 IFNA7P01567 189 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 SMIM11AP58511 58 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 TARBP2Q15633 366 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 LCN1P1Q5VSP4 162 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 FAM171BQ6P995 826 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 FITM2Q8N6M3 262 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 C1orf127Q8N9H9 656 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 LRRC46Q96FV0 321 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 HOPXQ9BPY8 73 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 GMIPQ9P107 970 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 ZNF232Q9UNY5 417 aa8.06□□□□□ -1.12
CTNND1-234ENST00000532844 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-234ENST00000532844 QSOX1O00391 747 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SLC9A3R1O14745 358 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MAGP20916 626 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 CCL23P55773 120 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SMAD3P84022 425 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MPP1Q00013 466 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MBTD1Q05BQ5 628 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TEAD4Q15561 434 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SMU1Q2TAY7 513 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TIGD2Q4W5G0 525 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 CWF19L1Q69YN2 538 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SPPL2CQ8IUH8 684 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PYROXD2Q8N2H3 581 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PNPT1Q8TCS8 783 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 FATE1Q969F0 183 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ST6GALNAC4Q9H4F1 302 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MAGEE1Q9HCI5 957 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 M0R036 132 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MAGEB3O15480 346 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TM7SF2O76062 418 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 OR4Q2P0C623 313 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 NR2F1P10589 423 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TLX1P31314 330 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 UGT2B15P54855 530 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 INAVAQ3KP66 663 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 REP15Q6BDI9 236 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 UBE2R2Q712K3 238 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ZBTB46Q86UZ6 589 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 RASAL3Q86YV0 1011 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SPERTQ8NA61 448 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TLCD1Q96CP7 247 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PHF12Q96QT6 1004 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PHB2Q99623 299 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ZNF350Q9GZX5 532 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 METTL8Q9H825 291 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 UPB1Q9UBR1 384 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ORC5O43913 435 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 AP2A1O95782 977 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 COL6A2P12110 1019 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 HNF4AP41235 474 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SEPHS1P49903 392 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MED22Q15528 200 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 RFX4Q33E94 735 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ANXA8L1Q5VT79 327 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TMEM110Q86TL2 294 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PM20D2Q8IYS1 436 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 NRSN1Q8IZ57 195 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 CCDC54Q8NEL0 328 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 EMID1Q96A84 441 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SPATA5L1Q9BVQ7 753 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TOR3AQ9H497 397 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SIX2Q9NPC8 291 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PSMD13Q9UNM6 376 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 RICTORQ6R327 1708 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 UBR1Q8IWV7 1749 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 IRGMA1A4Y4 181 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 OR6C75A6NL08 312 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 KCNU1A8MYU2 1149 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 NT5C1B-RDH14C9J2C7 533 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 GCATO75600 419 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 GATBO75879 557 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 RLN2P04090 185 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 HOXC8P31273 242 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ARFIP1P53367 373 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 GRM3Q14832 879 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 GPR158Q5T848 1215 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SRFBP1Q8NEF9 429 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TWIST2Q8WVJ9 160 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 BTN2A3PQ96KV6 586 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TRMOQ9BU70 441 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TMEM109Q9BVC6 243 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms