RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 GPR21Q99679 349 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 RIOK2Q9BVS4 552 aaKnown RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 BRINP2Q9C0B6 783 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 KLF15Q9UIH9 416 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 HS3ST4Q9Y661 456 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TRIM38O00635 465 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 COCHO43405 550 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PIAS1O75925 651 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 RGS20O76081 388 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 C4BPBP20851 252 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 CDC42P60953 191 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 NEDD8Q15843 81 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 C22orf39Q6P5X5 142 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 C8orf59Q8N0T1 100 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PPCDCQ96CD2 204 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 ITCHQ96J02 903 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 KLHL1Q9NR64 748 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 MTRRQ9UBK8 725 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 COG5Q9UP83 839 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 NOL4O94818 638 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 CD48P09326 243 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 IGFALSP35858 605 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 BNIP2Q12982 314 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PITRM1Q5JRX3 1037 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 HGSNATQ68CP4 663 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TRABD2AQ86V40 505 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 C19orf60Q96EN9 201 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 ZSCAN5AQ9BUG6 496 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 CRTAC1Q9NQ79 661 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 RPRD1BQ9NQG5 326 aaKnown RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 NOCTQ9UK39 431 aaKnown RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 OR1F1O43749 312 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 MMP20O60882 483 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 UNC5CO95185 931 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 GJB5O95377 273 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 JMJD7P0C870 316 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ITPKBP27987 946 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 GJA8P48165 433 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CCNHP51946 323 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ITGA1P56199 1179 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CCNYL2Q5T2Q4 361 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 TSTD2Q5T7W7 516 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CMC1Q7Z7K0 106 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PRSS58Q8IYP2 241 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 UNC5BQ8IZJ1 945 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CENPIQ92674 756 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PANX1Q96RD7 426 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 TWNKQ96RR1 684 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CAB39LQ9H9S4 337 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CHRAC1Q9NRG0 131 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 SEMA3GQ9NS98 782 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 FNIP2Q9P278 1114 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 NUP62P37198 522 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 GSTM5P46439 218 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 RUNX3Q13761 415 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 LRRTM4Q86VH4 590 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 POP5Q969H6 163 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ATG10Q9H0Y0 220 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 COPS7AQ9UBW8 275 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 A0A087WXM4 84 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CENPXA8MT69 81 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 HCRTO43612 131 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 COL6A2P12110 1019 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ZNF24P17028 368 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PTGER3P43115 390 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 DEFB103AP81534 67 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PTP4A2Q12974 167 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 NFATC2Q13469 925 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 TOP3AQ13472 1001 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 RNF44Q7L0R7 432 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 SNX20Q7Z614 316 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 DCAF4L2Q8NA75 395 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ZCCHC10Q8TBK6 192 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 NELL2Q99435 816 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 HDHD2Q9H0R4 259 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 OSER1Q9NX31 292 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CDC14AQ9UNH5 594 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 NT5EP21589 574 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 OXTRP30559 389 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 CSNK2BP67870 215 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 RAB33AQ14088 237 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 RTP2Q5QGT7 225 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 C9orf64Q5T6V5 341 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 FAM3CQ92520 227 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 KIAA1143Q96AT1 154 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms