RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 WRAP53Q9BUR4 548 aaKnown RBP6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 NT5MQ9NPB1 228 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 PCDH12Q9NPG4 1184 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 MBNL1Q9NR56 388 aaKnown RBP6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 RBM22Q9NW64 420 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 NLGN3Q9NZ94 848 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 IMPACTQ9P2X3 320 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 DKK3Q9UBP4 350 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 LCMT1Q9UIC8 334 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 DMTF1Q9Y222 760 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 HEY1Q9Y5J3 304 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 MYLKQ15746 1914 aa6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 SPTBN1Q01082 2364 aaKnown RBP6.99□□□□□ -1.29
TRIM53CP-201ENST00000531490 KCNK1O00180 336 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TNFRSF10CO14798 259 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PJA2O43164 708 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 HTRA2O43464 458 aaPredicted RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 NRDCO43847 1150 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 CST8O60676 142 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 MAGEC1O60732 1142 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PRLP01236 227 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 KRT1P04264 644 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 GP1BAP07359 652 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ALPPL2P10696 532 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 CCNB1P14635 433 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 GM2AP17900 193 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 HNRNPA2B1P22626 353 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SERPINB6P35237 376 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 CCNFP41002 786 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 MMP13P45452 471 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PEX5P50542 639 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 RENBPP51606 427 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 NAP1L1P55209 391 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 DSC2Q02487 901 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 BCL2L1Q07817 233 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ITKQ08881 620 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TRAF2Q12933 501 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SGCGQ13326 291 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 FZD2Q14332 565 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZNF235Q14590 738 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 CLCA4Q14CN2 919 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TMEM52BQ4KMG9 183 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SPOCD1Q6ZMY3 1216 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PTAR1Q7Z6K3 402 aaPredicted RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ABI3BPQ7Z7G0 1075 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 B3GNT8Q7Z7M8 397 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 DAAM2Q86T65 1068 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 RFX6Q8HWS3 928 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 LRRC49Q8IUZ0 686 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PELI3Q8N2H9 469 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 CNTD1Q8N815 330 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZNF548Q8NEK5 533 aaPredicted RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ARRDC2Q8TBH0 407 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 HCAR2Q8TDS4 363 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PDCD6IPQ8WUM4 868 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 MAML1Q92585 1016 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 RAB7BQ96AH8 199 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 KIRREL1Q96J84 757 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 NUDCD1Q96RS6 583 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TUBGCP5Q96RT8 1024 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SEMA3CQ99985 751 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 MGME1Q9BQP7 344 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 HEMGNQ9BXL5 484 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 MAK16Q9BXY0 300 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TCEAL2Q9H3H9 227 aaPredicted RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 ATP13A3Q9H7F0 1226 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SYNDIG1Q9H7V2 258 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 C10orf88Q9H8K7 445 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PNMA8BQ9ULN7 279 aaPredicted RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 PCDHGA8Q9Y5G5 932 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 HS3ST3A1Q9Y663 406 aa6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
TRIM53CP-201ENST00000531490 TSPAN11A1L157 253 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 GRID2IPA4D2P6 1211 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 BTNL10A8MVZ5 291 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 APOL1O14791 398 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 TM7SF2O76062 418 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZRANB2O95218 330 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 NTRK1P04629 796 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 HLA-DQB2P05538 268 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 MMP2P08253 660 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 GP1BBP13224 206 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PECAM1P16284 738 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CTPS1P17812 591 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 XPAP23025 273 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 SERPINA4P29622 427 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 SLC5A2P31639 672 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 AKT2P31751 481 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 DUSP3P51452 185 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 VAV2P52735 878 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 HK2P52789 917 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PPIDQ08752 370 aaKnown RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 AP1B1Q10567 949 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZBTB17Q13105 803 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 C1orf61Q13536 156 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 TCEA2Q15560 299 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 TBR1Q16650 682 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 SKIDA1Q1XH10 827 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms