RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 KCTD16Q68DU8 428 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 FAM45BPQ6NSW5 357 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 NAPRTQ6XQN6 538 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 MACC1Q6ZN28 852 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 RAPH1Q70E73 1250 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 C11orf74Q86VG3 221 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 CEP97Q8IW35 865 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 FAM45AQ8TCE6 357 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 MZB1Q8WU39 189 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 NELL1Q92832 810 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 TM9SF3Q9HD45 589 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 MRPL40Q9NQ50 206 aaKnown RBP18.78■□□□□ 0.6
SMPD1-205ENST00000531303 SNX15Q9NRS6 342 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 ZNHIT2Q9UHR6 403 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 NOVA2Q9UNW9 492 aaKnown RBP18.78■□□□□ 0.6
SMPD1-205ENST00000531303 SGTAO43765 313 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 VPS26AO75436 327 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 ALDOAP04075 364 aaKnown RBP18.77■□□□□ 0.6
SMPD1-205ENST00000531303 WNT1P04628 370 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 CEACAM5P06731 702 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 THEGLP0DJG4 465 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 HTR1BP28222 390 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 RABIFP47224 123 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 SERPINB8P50452 374 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 KIAA1024LP59773 190 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 YPEL5P62699 121 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 PLA2G4EQ3MJ16 856 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 PPM1JQ5JR12 505 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 PMS2CLQ68D20 193 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 PRR23BQ6ZRT6 265 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 SRRM1Q8IYB3 904 aaKnown RBP18.77■□□□□ 0.6
SMPD1-205ENST00000531303 SIDT2Q8NBJ9 832 aaKnown RBP18.77■□□□□ 0.6
SMPD1-205ENST00000531303 WDR92Q96MX6 357 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 GPR21Q99679 349 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 SH3GL2Q99962 352 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 VPS11Q9H270 941 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 PCYT1BQ9Y5K3 369 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-205ENST00000531303 COMMD10Q9Y6G5 202 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 ZNF318Q5VUA4 2279 aa18.77■□□□□ 0.6
SMPD1-205ENST00000531303 TDRD6O60522 2096 aaKnown RBP18.77■□□□□ 0.6
SMPD1-205ENST00000531303 H3BMM5 538 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 NUAK1O60285 661 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 DNAJC6O75061 913 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 AP2A2O94973 939 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 HOXC4P09017 264 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 STMN1P16949 149 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 FDXRP22570 491 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 CD38P28907 300 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 RACK1P63244 317 aaKnown RBP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 TIAL1Q01085 375 aaKnown RBP eCLIP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 SIM2Q14190 667 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 LPAL2Q16609 132 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 RD3Q7Z3Z2 195 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 C4orf33Q8N1A6 199 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 OR56A4Q8NGH8 313 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 DNASE2BQ8WZ79 361 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 TSACCQ96A04 125 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 TSPAN17Q96FV3 270 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 PGM2Q96G03 612 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 CYP4F12Q9HCS2 524 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 FGF22Q9HCT0 170 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 TAS2R13Q9NYV9 303 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 TSR3Q9UJK0 312 aaKnown RBP18.77■□□□□ 0.59
SMPD1-205ENST00000531303 MED16Q9Y2X0 877 aa18.77■□□□□ 0.59
SMPD1-205ENST00000531303 BCAT2O15382 392 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 RFPL1O75677 317 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 SYF2O95926 243 aaKnown RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 FUCA1P04066 466 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 PYGBP11216 843 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 KELP23276 732 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 CNR2P34972 360 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 GNPDA1P46926 289 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 RAB10P61026 200 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 ILF2Q12905 390 aaKnown RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 PDAP1Q13442 181 aaKnown RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 TCEA2Q15560 299 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 TTMPQ5BVD1 217 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 TRABD2AQ86V40 505 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 SLC22A18ASQ8N1D0 253 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 ZBTB44Q8NCP5 570 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 OR1E3Q8WZA6 343 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 PANX3Q96QZ0 392 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 SLC30A3Q99726 388 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 STMN4Q9H169 189 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 TM7SF3Q9NS93 570 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 PCMTD2Q9NV79 361 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 KLQ9UEF7 1012 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 TRMT6Q9UJA5 497 aaKnown RBP18.76■□□□□ 0.59
SMPD1-205ENST00000531303 SUFUQ9UMX1 484 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 SLC17A4Q9Y2C5 497 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 GPSM3Q9Y4H4 160 aa18.76■□□□□ 0.59
SMPD1-205ENST00000531303 A0A096LPK6 155 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 A0A1W2PR77 199 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 F8W8V4 182 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 GRID2O43424 1007 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 POP7O75817 140 aaKnown RBP18.75■□□□□ 0.59
SMPD1-205ENST00000531303 FTH1P02794 183 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 ATP5DP30049 168 aa18.75■□□□□ 0.59
SMPD1-205ENST00000531303 CSNK1EP49674 416 aaKnown RBP18.75■□□□□ 0.59
SMPD1-205ENST00000531303 PRLHRP49683 370 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms