RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 AP2M1Q96CW1 435 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 HDAC11Q96DB2 347 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 C18orf8Q96DM3 657 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 FAM81BQ96LP2 452 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 PLEKHG4BQ96PX9 1271 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 MCCC1Q96RQ3 725 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 AGAP2Q99490 1192 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 MLPHQ9BV36 600 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 ABCG8Q9H221 673 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ZNF552Q9H707 407 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 LRRC19Q9H756 370 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 FGF21Q9NSA1 209 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ZNHIT2Q9UHR6 403 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 RCOR1Q9UKL0 485 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 IGHV5-51A0A0C4DH38 117 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 HTRA2O43464 458 aaPredicted RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 SOCS5O75159 536 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 IPO13O94829 963 aaKnown RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 VIPP01282 170 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 THBS1P07996 1170 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 ZSCAN22P10073 491 aaPredicted RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 CD99P14209 185 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 SDC4P31431 198 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 CA5AP35218 305 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 MARSP56192 900 aaKnown RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 GSDMDP57764 484 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 PNOCQ13519 176 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 PTPRRQ15256 657 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 CCDC14Q49A88 953 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 ATL3Q6DD88 541 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 DUS1LQ6P1R4 473 aaKnown RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 ZNF765Q7L2R6 523 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 ARCQ7LC44 396 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 STRADAQ7RTN6 431 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 MRGPRGQ86SM5 289 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 DSELQ8IZU8 1212 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 SLC38A9Q8NBW4 561 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 PPP4R1Q8TF05 950 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 FAR1Q8WVX9 515 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 UBXN4Q92575 508 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 SCAMP4Q969E2 229 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 C14orf79Q96F83 325 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 ZDHHC12Q96GR4 267 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 CELF6Q96J87 481 aaKnown RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 LRFN5Q96NI6 719 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 NLNQ9BYT8 704 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 GOLPH3LQ9H4A5 285 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 OSGEPL1Q9H4B0 414 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 CATSPERBQ9H7T0 1116 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 ZBTB20Q9HC78 741 aaPredicted RBP8.06□□□□□ -1.12
CD44-232ENST00000531118 NEUROD4Q9HD90 331 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 POT1Q9NUX5 634 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 RMND1Q9NWS8 449 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 SEMA5BQ9P283 1151 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 EPHA6Q9UF33 1036 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 RTTNQ86VV8 2226 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
CD44-232ENST00000531118 A0A0U1RQS6 177 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 A0A1W2PQ67 120 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 A0A1W2PQJ5 194 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 C19orf84I3L1E1 186 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 PSMA7O14818 248 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 FGF10O15520 208 aaPredicted RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 CREB3O43889 395 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 KLHL41O60662 606 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 PALMO75781 387 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 JCHAINP01591 159 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 ATP1A1P05023 1023 aaKnown RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 PYGLP06737 847 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 CAPN1P07384 714 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 XRCC1P18887 633 aaPredicted RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 OTX2P32243 289 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 RORAP35398 523 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 PTPN9P43378 593 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 SCNN1BP51168 640 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 ART1P52961 327 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 KCNK10P57789 538 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 TUBB4BP68371 445 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 OTUD4Q01804 1114 aaKnown RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 TLE4Q04727 773 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 TRAF2Q12933 501 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 TUBB2AQ13885 445 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 GPR18Q14330 331 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 NCF4Q15080 339 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 GPR19Q15760 415 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 PLA2G4EQ3MJ16 856 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 DCAF10Q5QP82 559 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 LRRC66Q68CR7 880 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 FAM180AQ6UWF9 173 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 RPTNQ6XPR3 784 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 USP45Q70EL2 814 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 CLEC1AQ8NC01 280 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 MSANTD4Q8NCY6 345 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 JOSD2Q8TAC2 188 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms