RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 NAP1L5Q96NT1 182 aaPredicted RBP7.3□□□□□ -1.24
CHKA-205ENST00000530730 SERPINB11Q96P15 392 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 GANQ9H2C0 597 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 AASDHPPTQ9NRN7 309 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 IFNKQ9P0W0 207 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 PTGFRNQ9P2B2 879 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 LIMA1Q9UHB6 759 aaKnown RBP7.3□□□□□ -1.24
CHKA-205ENST00000530730 FZD4Q9ULV1 537 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 PCDHGA1Q9Y5H4 931 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 COX11Q9Y6N1 276 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 ACACAQ13085 2346 aa7.3□□□□□ -1.24
CHKA-205ENST00000530730 URB1O60287 2271 aaKnown RBP7.3□□□□□ -1.24
CHKA-205ENST00000530730 ITIH6Q6UXX5 1313 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3DA0A087WVF3 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3IA0A087WXS9 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3EA0A087X179 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3KA0A087X1G2 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TYW5A2RUC4 315 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3FA6NER0 549 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 SMTNL1A8MU46 457 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3LB9A6J9 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 E9PAM4 449 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 FOXN3O00409 490 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 CAPN9O14815 690 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 AKR1B10O60218 316 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 SPDEFO95238 335 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 MOCS3O95396 460 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TRUB2O95900 331 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 IL1BP01584 269 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3HP0C7X1 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 ABCB4P21439 1286 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 C5AR1P21730 350 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 ECHS1P30084 290 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 PSMD8P48556 350 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 NUMBP49757 651 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 STK19P49842 368 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 CHN2P52757 468 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 METAP1P53582 386 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 ADPRHP54922 357 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 NXPH1P58417 271 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 YWHAZP63104 245 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 TPM4P67936 248 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 GCNT1Q02742 428 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 FAPQ12884 760 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TARDBPQ13148 414 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHKA-205ENST00000530730 EIF4EBP2Q13542 120 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 TAF5Q15542 800 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 MUM1Q2TAK8 710 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 INAVAQ3KP66 663 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 C2CD6Q53TS8 623 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 KLHDC7AQ5VTJ3 777 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 RNF219Q5W0B1 726 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 RAP1GAP2Q684P5 730 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3GQ6DHY5 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3CQ6IPX1 549 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 Q6ZVL8 140 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 PHLDB2Q86SQ0 1253 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TMEM110Q86TL2 294 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 TBC1D3Q8IZP1 549 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 EID2Q8N6I1 236 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 C1orf131Q8NDD1 294 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 NEK11Q8NG66 645 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 NTN5Q8WTR8 489 aaPredicted RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 FAM149B1Q96BN6 582 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 SERAC1Q96JX3 654 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 PRMT1Q99873 361 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 BPIFA3Q9BQP9 254 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 ERVMER34-1Q9H9K5 563 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 GDF3Q9NR23 364 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 SEPT11Q9NVA2 429 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 CYTH4Q9UIA0 394 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 CNTN6Q9UQ52 1028 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 SIK3Q9Y2K2 1263 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 ASXL3Q9C0F0 2248 aa7.29□□□□□ -1.24
CHKA-205ENST00000530730 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
CHKA-205ENST00000530730 KCNU1A8MYU2 1149 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 F8VZ95 297 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 LATO43561 262 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 RTN2O75298 545 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 ESRRBO95718 433 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 APOEP02649 317 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 CDK4P11802 303 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 UCHL3P15374 230 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 PDGFRAP16234 1089 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 ITPKBP27987 946 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 EPHA8P29322 1005 aaPredicted RBP7.28□□□□□ -1.24
CHKA-205ENST00000530730 PTPN7P35236 360 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 DRD3P35462 400 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 NNMTP40261 264 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 ACADSBP45954 432 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 RXRGP48443 463 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 ARRB1P49407 418 aaPredicted RBP7.28□□□□□ -1.24
CHKA-205ENST00000530730 ACADVLP49748 655 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 PLK1P53350 603 aa7.28□□□□□ -1.24
CHKA-205ENST00000530730 PITX1P78337 314 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms