RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, human

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA1-208	ENST00000529524	POLR1A	O95602	1720 aa	Predicted RBP	3.78	□□□□□ -1.8
PSMA1-208	ENST00000529524	MYO5C	Q9NQX4	1742 aa		3.78	□□□□□ -1.8
PSMA1-208	ENST00000529524	KIF14	Q15058	1648 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	TAF4	O00268	1085 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	PSMD14	O00487	310 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	CLIC2	O15247	247 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	PRKN	O60260	465 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	CRLF1	O75462	422 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	CCNDBP1	O95273	360 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	PRSS56	P0CW18	603 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	ZNF182	P17025	639 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	NOV	P48745	357 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	LUM	P51884	338 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	TAS2R38	P59533	333 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	GNB1	P62873	340 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	RPL24	P83731	157 aa	Known RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	FRG1	Q14331	258 aa	Known RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	FGFBP1	Q14512	234 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	COL28A1	Q2UY09	1125 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	HIST2H2BD	Q6DRA6	164 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	CACNA2D4	Q7Z3S7	1137 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	ADSSL1	Q8N142	457 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	IL17RE	Q8NFR9	667 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	WDR20	Q8TBZ3	569 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	SLC38A5	Q8WUX1	472 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	NR1H4	Q96RI1	486 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	NAP1L4	Q99733	375 aa	Known RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	LRMDA	Q9H2I8	198 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	FBXL2	Q9UKC9	423 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	INTS6	Q9UL03	887 aa	Known RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	JRKL	Q9Y4A0	524 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	PRX	Q9BXM0	1461 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	MIA2	Q96PC5	1412 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	DEPDC5	O75140	1603 aa		3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	DNMT1	P26358	1616 aa	Known RBP	3.77	□□□□□ -1.81
PSMA1-208	ENST00000529524	KDM3A	Q9Y4C1	1321 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	ABCC1	P33527	1531 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	SIGLEC1	Q9BZZ2	1709 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	A2M	P01023	1474 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524		A0A1W2PQM1	296 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	IPO7	O95373	1038 aa	Known RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	ATP1A3	P13637	1013 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	PIP4K2A	P48426	406 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	OLR1	P78380	273 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	OLIG2	Q13516	323 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	ZNF790	Q6PG37	636 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	QSOX2	Q6ZRP7	698 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	TRPT1	Q86TN4	253 aa	Known RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	CCDC13	Q8IYE1	715 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	OR5R1	Q8NH85	324 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	PSPC1	Q8WXF1	523 aa	Known RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	RFFL	Q8WZ73	363 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	INTS12	Q96CB8	462 aa	Known RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	GRAMD2B	Q96HH9	432 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	PIP5K1A	Q99755	562 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	PCGF1	Q9BSM1	259 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	DCTN5	Q9BTE1	182 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	SLC28A3	Q9HAS3	691 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	TCP11L1	Q9NUJ3	509 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	LIMA1	Q9UHB6	759 aa	Known RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	MKLN1	Q9UL63	735 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	RNF215	Q9Y6U7	377 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	MAU2	Q9Y6X3	613 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	TRO	Q12816	1431 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	SAMD9	Q5K651	1589 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524	VWDE	Q8N2E2	1590 aa		3.76	□□□□□ -1.81
PSMA1-208	ENST00000529524		A0A1W2PRG0	241 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	CTAGE9	A4FU28	777 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	SH2B2	O14492	632 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	VCY	O14598	125 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	HS3ST1	O14792	307 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	EIF3D	O15371	548 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	EPB41L2	O43491	1005 aa	Known RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	CTSV	O60911	334 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	NKX2-2	O95096	273 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	FTCD	O95954	541 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	CTAGE8	P0CG41	777 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	IL7R	P16871	459 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	BSG	P35613	385 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	ARCN1	P48444	511 aa	Known RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	COG7	P83436	770 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	TMEM115	Q12893	351 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	DCST1	Q5T197	706 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	FRG2	Q64ET8	278 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	RBMS3	Q6XE24	437 aa	Known RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	PQLC2	Q6ZP29	291 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	PLEKHM3	Q6ZWE6	761 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	CTAGE4	Q8IX94	777 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	BEST3	Q8N1M1	668 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	DNAAF4	Q8WXU2	420 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	LRRC59	Q96AG4	307 aa	Known RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	ART5	Q96L15	291 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	LINC00479	Q96M42	142 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	ASCL2	Q99929	193 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	PDZD7	Q9H5P4	517 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	DIAPH3	Q9NSV4	1193 aa		3.75	□□□□□ -1.81
PSMA1-208	ENST00000529524	EHD2	Q9NZN4	543 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms