RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PRAMEP78395 509 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CDK3Q00526 305 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ACVR1Q04771 509 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 LAMB3Q13751 1172 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CRYMQ14894 314 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 SKIDA1Q1XH10 827 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ATP13A5Q4VNC0 1218 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ZRANB3Q5FWF4 1079 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ZNF648Q5T619 568 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ZDHHC20Q5W0Z9 365 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 DOK6Q6PKX4 331 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ADAMTSL4Q6UY14 1074 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CENPUQ71F23 418 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 NLRP9Q7RTR0 991 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 RAVER1Q8IY67 606 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ZBED8Q8IZ13 594 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 SLC25A45Q8N413 288 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 TRAM1L1Q8N609 369 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 NAT14Q8WUY8 206 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 OR1E3Q8WZA6 343 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 HDAC10Q969S8 669 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 TSACCQ96A04 125 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CDKN2AIPNLQ96HQ2 116 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 EBNA1BP2Q99848 306 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 APOOQ9BUR5 198 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CDH19Q9H159 772 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A7Q9HAW7 530 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A10Q9HAW8 530 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A8Q9HAW9 530 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 FGF22Q9HCT0 170 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 DNAJC28Q9NX36 388 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ANKMY1Q9P2S6 941 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 TMPRSS11EQ9UL52 423 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 RIMKLBQ9ULI2 386 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 NFU1Q9UMS0 254 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 PCDHGA1Q9Y5H4 931 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 HS3ST3A1Q9Y663 406 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 OAS3Q9Y6K5 1087 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 RPS6KL1Q9Y6S9 549 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 FAM237BA0A1B0GVD1 139 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 TMEM202A6NGA9 273 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 GOLGA8KD6RF30 607 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 GOLGA8TH3BQL2 631 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PCDHGA12O60330 932 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 MTX2O75431 263 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 RFPL3O75679 317 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 GOT2P00505 430 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 FUCA1P04066 466 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 MYCLP1P12525 358 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PGAM1P18669 254 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ITGALP20701 1170 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PSMA3P25788 255 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 FOXN2P32314 431 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 POLD2P49005 469 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 THOP1P52888 689 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 KIAA1024LP59773 190 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 NFATC2Q13469 925 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CUL1Q13616 776 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 NFATC4Q14934 902 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ANKRD20A4Q4UJ75 823 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 KHDC1Q4VXA5 237 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 KIAA0930Q6ICG6 404 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 AFTPHQ6ULP2 937 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 OTUD6BQ8N6M0 293 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 FBXO36Q8NEA4 188 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 OR6P1Q8NGX9 317 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 GLYATL1Q969I3 302 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CCDC97Q96F63 343 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 HIC2Q96JB3 615 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 FMO2Q99518 471 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 TEX101Q9BY14 249 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CLPBQ9H078 707 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ASB8Q9H765 288 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ANKZF1Q9H8Y5 726 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PLAC1Q9HBJ0 212 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PHPT1Q9NRX4 125 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 MTRF1LQ9UGC7 380 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ZC3H7BQ9UGR2 993 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CRLS1Q9UJA2 301 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 APPL1Q9UKG1 709 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 CNOT6Q9ULM6 557 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 PLEKHM1Q9Y4G2 1056 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 ST14Q9Y5Y6 855 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 SLC30A1Q9Y6M5 507 aa11.42□□□□□ -0.58
CCDC90B-210ENST00000528149 COL27A1Q8IZC6 1860 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 ZCWPW2A0A1B0GU75 182 aa11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 H7C0S8 307 aa11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 CACNB4O00305 520 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 TERTO14746 1132 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 EIF3HO15372 352 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 USP1O94782 785 aa11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 VAPBO95292 243 aa11.41□□□□□ -0.58
CCDC90B-210ENST00000528149 PYGLP06737 847 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms