RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CLDN1O95832 211 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 PDGFAP04085 211 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 FURINP09958 794 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 POU3F2P20265 443 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 POLD2P49005 469 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 FOXM1Q08050 763 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SEMA5AQ13591 1074 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 INPP5JQ15735 1006 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 MFSD7Q6UXD7 560 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 PLXDC1Q8IUK5 500 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SFRP1Q8N474 314 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SLC37A2Q8TED4 501 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 PTCD2Q8WV60 388 aaKnown RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TEKT5Q96M29 485 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 AGAP3Q96P47 875 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 OR2M4Q96R27 311 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 AGAP2Q99490 1192 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 VAT1Q99536 393 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 EPB41L1Q9H4G0 881 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 ZFYVE1Q9HBF4 777 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 LUC7LQ9NQ29 371 aaKnown RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 RAD18Q9NS91 495 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 MAP10Q9P2G4 905 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 NFKBIL1Q9UBC1 381 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TMEM98Q9Y2Y6 226 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 PCDHA13Q9Y5I0 950 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TRBV23OR9-2A0A075B6M9 112 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 A6NCN8 305 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 WIPF3A6NGB9 483 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 TCP11X1B4DZS4 312 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 GPR89AB7ZAQ6 455 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 CST8O60676 142 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SORBS2O94875 1100 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 EPOP01588 193 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 MT-ND3P03897 115 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 GPR89BP0CG08 455 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 FECHP22830 423 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 CYLC1P35663 651 aaPredicted RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 MAPK9P45984 424 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 EPHA4P54764 986 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 DCDC1P59894 354 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 HHEXQ03014 270 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 CDK18Q07002 472 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 MRPL49Q13405 166 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 IL11RAQ14626 422 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 NAA30Q147X3 362 aaPredicted RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PRKD1Q15139 912 aaPredicted RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SPA17Q15506 151 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 NADK2Q4G0N4 442 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 C1QL3Q5VWW1 255 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 C11orf63Q6NUN7 778 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 DOK6Q6PKX4 331 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 NPNTQ6UXI9 565 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SPOCD1Q6ZMY3 1216 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 GALNT13Q8IUC8 556 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 RASGRP3Q8IV61 690 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 KATNAL2Q8IYT4 538 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 GALNT6Q8NCL4 622 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 TFB1MQ8WVM0 346 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 THAP4Q8WY91 577 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 P3H4Q92791 437 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 EID2BQ96D98 161 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 C5orf34Q96MH7 638 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PANX2Q96RD6 677 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 GLOD4Q9HC38 313 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SLAMF7Q9NQ25 335 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 KLHL3Q9UH77 587 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PADI1Q9ULC6 663 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 G3BP2Q9UN86 482 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 EFR3BQ9Y2G0 817 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 HYOU1Q9Y4L1 999 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PCDHGA9Q9Y5G4 932 aaKnown RBP10.37□□□□□ -0.75
CPSF1-203ENST00000527916 PCDHGA6Q9Y5G7 932 aa10.37□□□□□ -0.75
CPSF1-203ENST00000527916 LOC285095A0A1B0GVY8 99 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 FADS2P1A8MWK0 482 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 HACD1B0YJ81 288 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 C21orf140B9A014 251 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 DNAJB5O75953 348 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 NDUFA10O95299 355 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ASMTLO95671 621 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 NDST3O95803 873 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 LDLRP01130 860 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 SLC2A4P14672 509 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 PTPN3P26045 913 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 LEPRP48357 1165 aaKnown RBP10.36□□□□□ -0.75
CPSF1-203ENST00000527916 CLCNKAP51800 687 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms