RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PDPK2PQ6A1A2 396 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 Q6ZSR6 202 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 RFLNAQ6ZTI6 216 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 TRMT10CQ7L0Y3 403 aaKnown RBP17.09■□□□□ 0.33
CCS-204ENST00000526066 PALM2Q8IXS6 379 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 FAM181AQ8N9Y4 354 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCS-204ENST00000526066 CFAP36Q96G28 342 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 C9orf72Q96LT7 481 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 TBATAQ96M53 351 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
CCS-204ENST00000526066 IL26Q9NPH9 171 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 FKBPLQ9UIM3 349 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 COL6A6A6NMZ7 2263 aa17.09■□□□□ 0.33
CCS-204ENST00000526066 CCDC78A2IDD5 438 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CPED1A4D0V7 1026 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 K7ESM1 405 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 PAK4O96013 591 aaPredicted RBP17.08■□□□□ 0.32
CCS-204ENST00000526066 PYGLP06737 847 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 TEAD1P28347 426 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 ARCN1P48444 511 aaKnown RBP17.08■□□□□ 0.32
CCS-204ENST00000526066 CLDN2P57739 230 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 PRAMEP78395 509 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 TMPRSS15P98073 1019 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 LRRC14Q15048 493 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 BRD3Q15059 726 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 MAP9Q49MG5 647 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 AFTPHQ6ULP2 937 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 PCSK4Q6UW60 755 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CES3Q6UWW8 571 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CYS1Q717R9 158 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 ABI3BPQ7Z7G0 1075 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 TRAM1L1Q8N609 369 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
CCS-204ENST00000526066 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 GLMNQ92990 594 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CAVIN3Q969G5 261 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 HDAC10Q969S8 669 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CENPTQ96BT3 561 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 AP2M1Q96CW1 435 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 KLF6Q99612 283 aaPredicted RBP17.08■□□□□ 0.32
CCS-204ENST00000526066 ZSCAN5AQ9BUG6 496 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 CDC42EP4Q9H3Q1 356 aaKnown RBP17.08■□□□□ 0.32
CCS-204ENST00000526066 LRRC4CQ9HCJ2 640 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
CCS-204ENST00000526066 GLYATL1P3A0A0U1RQE8 302 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 CCDC162PA2VCL2 907 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 CCDC151A5D8V7 595 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 GAPDHSO14556 408 aaPredicted RBP17.07■□□□□ 0.32
CCS-204ENST00000526066 ARNTP27540 789 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 RPIAP49247 311 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 PMS2P54278 862 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 PEX6Q13608 980 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 LONRF1Q17RB8 773 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 ISXQ2M1V0 245 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 ZNF542PQ5EBM4 170 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 ZNF449Q6P9G9 518 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 PARGQ86W56 976 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 ARL14Q8N4G2 192 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 ZNF548Q8NEK5 533 aaPredicted RBP17.07■□□□□ 0.32
CCS-204ENST00000526066 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 RIOK2Q9BVS4 552 aaKnown RBP17.07■□□□□ 0.32
CCS-204ENST00000526066 WDR70Q9NW82 654 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 CD84Q9UIB8 345 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 SATB2Q9UPW6 733 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 HS3ST3A1Q9Y663 406 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 TRPM6Q9BX84 2022 aa17.07■□□□□ 0.32
CCS-204ENST00000526066 SCN8AQ9UQD0 1980 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 AGAP14A8MT82 685 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 B8ZZF3 427 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 CCL22O00626 93 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 ERLIN1O75477 346 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SRP72O76094 671 aaKnown RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 VAPBO95292 243 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 PRAMEF1O95521 474 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 MYF5P13349 255 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SSTR1P30872 391 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 MC4RP32245 332 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 RABIFP47224 123 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 GPX6P59796 221 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 ITGA9Q13797 1035 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 LY6DQ14210 128 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 CHRNA6Q15825 494 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 KYNUQ16719 465 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 GPR33Q49SQ1 333 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 ALS2CLQ60I27 953 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 FOXR1Q6PIV2 292 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 IGF2-ASQ6U949 168 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 FAM151BQ6UXP7 276 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 KYAT3Q6YP21 454 aaKnown RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 RBM44Q6ZP01 1051 aaKnown RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 C3orf62Q6ZUJ4 267 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
CCS-204ENST00000526066 SNX20Q7Z614 316 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 LMNTD2Q8IXW0 634 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 SLC22A18ASQ8N1D0 253 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 OR6P1Q8NGX9 317 aa17.06■□□□□ 0.32
CCS-204ENST00000526066 OR4L1Q8NH43 312 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms