RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF7P17097 686 aaPredicted RBP20.46■□□□□ 0.87
CD44-222ENST00000526025 PRLHRP49683 370 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 CTSCP53634 463 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 CTBSQ01459 385 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 SEMA3AQ14563 771 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 ZNF449Q6P9G9 518 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 C11orf96Q7Z7L8 435 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 LRRC6Q86X45 466 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 CILP2Q8IUL8 1156 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 TRAPPC5Q8IUR0 188 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 RELL1Q8IUW5 271 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 NAXDQ8IW45 347 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 FAM181AQ8N9Y4 354 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 FBXO36Q8NEA4 188 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 PYROXD1Q8WU10 500 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 PLAC1Q9HBJ0 212 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 SAYSD1Q9NPB0 183 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 GPSM3Q9Y4H4 160 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 PRR19A6NJB7 356 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 YY2O15391 372 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 SGTAO43765 313 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 VCLP18206 1134 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 CSRP1P21291 193 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 ECHS1P30084 290 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 ADARP55265 1226 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 DMPKQ09013 629 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 THOC5Q13769 683 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 FASTKD3Q14CZ7 662 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 ZCCHC8Q6NZY4 707 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 TMEM220Q6QAJ8 160 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 NRROSQ86YC3 692 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 CNTN4Q8IWV2 1026 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 GSDMBQ8TAX9 411 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 BAHD1Q8TBE0 780 aaPredicted RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 CERS2Q96G23 380 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 VPS37BQ9H9H4 285 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 C20orf96Q9NUD7 363 aaPredicted RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 INTS10Q9NVR2 710 aaKnown RBP20.45■□□□□ 0.86
CD44-222ENST00000526025 NCKIPSDQ9NZQ3 722 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 PCOLCE2Q9UKZ9 415 aa20.45■□□□□ 0.86
CD44-222ENST00000526025 CBFA2T3O75081 653 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 RHOXF2BP0C7M4 288 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 RPS3P23396 243 aaKnown RBP eCLIP20.44■□□□□ 0.86
CD44-222ENST00000526025 PMLP29590 882 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 C1orf61Q13536 156 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 C6orf132Q5T0Z8 1188 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 CRTC3Q6UUV7 619 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 CYS1Q717R9 158 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 TAF8Q7Z7C8 310 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 GALNT7Q86SF2 657 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 KCNMB4Q86W47 210 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 ANKMY2Q8IV38 441 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 SGF29Q96ES7 293 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 CFAP36Q96G28 342 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 FMO2Q99518 471 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 CDC6Q99741 560 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 RHOXF2Q9BQY4 288 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 RTKNQ9BST9 563 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 BOCQ9BWV1 1114 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 DOLKQ9UPQ8 538 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 ST14Q9Y5Y6 855 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 DMXL1Q9Y485 3027 aa20.44■□□□□ 0.86
CD44-222ENST00000526025 CNOT1A5YKK6 2376 aaKnown RBP20.44■□□□□ 0.86
CD44-222ENST00000526025 C17orf113A0A1B0GUU1 675 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 OR2AG2A6NM03 316 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 PRMT5O14744 637 aaPredicted RBP20.43■□□□□ 0.86
CD44-222ENST00000526025 SH3BP5O60239 455 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 SPAG6O75602 509 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 CELA2BP08218 269 aaPredicted RBP20.43■□□□□ 0.86
CD44-222ENST00000526025 ACP5P13686 325 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 MAGEA4P43358 317 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 HLTFQ14527 1009 aaKnown RBP eCLIP20.43■□□□□ 0.86
CD44-222ENST00000526025 TEX35Q5T0J7 233 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 ZNF470Q6ECI4 717 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 OGFOD3Q6PK18 319 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 KIAA0408Q6ZU52 694 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 CHST15Q7LFX5 561 aaPredicted RBP20.43■□□□□ 0.86
CD44-222ENST00000526025 AMZ2Q86W34 360 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 OTUD6BQ8N6M0 293 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 CCL4L1Q8NHW4 92 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 RHBDD1Q8TEB9 315 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 IFT81Q8WYA0 676 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 CAAP1Q9H8G2 361 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 MOCS1Q9NZB8 636 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 TAAR2Q9P1P5 351 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 BTBD3Q9Y2F9 522 aa20.43■□□□□ 0.86
CD44-222ENST00000526025 MGAT4DA6NG13 374 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 GOLGA8KD6RF30 607 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 GOLGA8TH3BQL2 631 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 TRIM38O00635 465 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 FFAR2O15552 330 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 NDUFS3O75489 264 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 POP7O75817 140 aaKnown RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 OR56A5P0C7T3 313 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 TNFRSF8P28908 595 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 ACTR1BP42025 376 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 CARSP49589 748 aaKnown RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 ACTR1AP61163 376 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms