RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 GYPCP04921 128 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SERPING1P05155 500 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 PYGLP06737 847 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 MMP2P08253 660 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 EBLN1P0CF75 366 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 TNNT1P13805 278 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SLC2A4P14672 509 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 BRAFP15056 766 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 XRCC1P18887 633 aaPredicted RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 IDSP22304 550 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 CCNCP24863 283 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 PBLDP30039 288 aaPredicted RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 CA5AP35218 305 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SERPINB6P35237 376 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 CD97P48960 835 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ZNF135P52742 658 aaPredicted RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 EPHA4P54764 986 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 TAS2R40P59535 323 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SLC25A11Q02978 314 aaKnown RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 GALNT2Q10471 571 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ZBTB17Q13105 803 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SEMA5AQ13591 1074 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 DPYSL3Q14195 570 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 GPR18Q14330 331 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 NOMO1Q15155 1222 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 GPR19Q15760 415 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 IFI16Q16666 785 aaKnown RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 HADHQ16836 314 aaKnown RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 RALGPS1Q5JS13 557 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 LCN10Q6JVE6 187 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 NPNTQ6UXI9 565 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 LRRTM4Q86VH4 590 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 PPP1R3BQ86XI6 285 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 RP1L1Q8IWN7 2480 aaPredicted RBP6.46□□□□□ -1.38
CD44-221ENST00000526000 PQLC3Q8N755 202 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 CNTD1Q8N815 330 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SPATA22Q8NHS9 363 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SPOCK2Q92563 424 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 MAML1Q92585 1016 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 C19orf60Q96EN9 201 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ZDHHC12Q96GR4 267 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 AGAP3Q96P47 875 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 PANX2Q96RD6 677 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 SLC25A23Q9BV35 468 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ISCUQ9H1K1 167 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ACTL8Q9H568 366 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 RMI1Q9H9A7 625 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ACSS2Q9NR19 701 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 RARRES3Q9UL19 164 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 TMPRSS11EQ9UL52 423 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 HEY1Q9Y5J3 304 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 COL12A1Q99715 3063 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 CREBBPQ92793 2442 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MYO1FO00160 1098 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MASP2O00187 686 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 KMOO15229 486 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 GPR39O43194 453 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PMPCBO75439 489 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 POP7O75817 140 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 MTA2O94776 668 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 POLBP06746 335 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MYBL1P10243 752 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 FGF5P12034 268 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 BPIP17213 487 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 NELFEP18615 380 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 CA4P22748 312 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 CES1P23141 567 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PTGIRP43119 386 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ARSEP51690 589 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 CLCNKAP51800 687 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PGDP52209 483 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PMS2P54278 862 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 RPS15P62841 145 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 AP1B1Q10567 949 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TUBB3Q13509 450 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 IL10RAQ13651 578 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MAP7Q14244 749 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 IL11RAQ14626 422 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PTPRCAPQ14761 206 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 PAFAH1B3Q15102 231 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 INPP5JQ15735 1006 aaPredicted RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 ATP13A5Q4VNC0 1218 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TIGD7Q6NT04 549 aaPredicted RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 TMEM220Q6QAJ8 160 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 FAM83HQ6ZRV2 1179 aaPredicted RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 DET1Q7L5Y6 550 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TMC3Q7Z5M5 1100 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 NT5DC3Q86UY8 548 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TRAPPC5Q8IUR0 188 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ZNF547Q8IVP9 402 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 CCDC170Q8IYT3 715 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TXLNBQ8N3L3 684 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 SLC25A41Q8N5S1 370 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 GPR150Q8NGU9 434 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 SSC4DQ8WTU2 575 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TEKT4Q8WW24 435 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 KLHL6Q8WZ60 621 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 RAPGEF5Q92565 580 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms