RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 ATP4BP51164 291 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 CLCN5P51795 746 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 SMN1Q16637 294 aaKnown RBP13.02□□□□□ -0.33
TRIM3-203ENST00000525074 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
TRIM3-203ENST00000525074 ATAD3BQ5T9A4 648 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 RAB44Q7Z6P3 723 aaPredicted RBP13.02□□□□□ -0.33
TRIM3-203ENST00000525074 MFSD4AQ8N468 514 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 BPIFB1Q8TDL5 484 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 TSPAN17Q96FV3 270 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 FCRL5Q96RD9 977 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 NFKBIZQ9BYH8 718 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 IKZF3Q9UKT9 509 aa13.02□□□□□ -0.33
TRIM3-203ENST00000525074 XIRP2A4UGR9 3374 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 MAFKO60675 156 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 UGT2B4P06133 528 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 MMP3P08254 477 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 C7P10643 843 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 CD1DP15813 335 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 GEMP55040 296 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 RCAN2Q14206 197 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 NOTUMQ6P988 496 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 BNIPLQ7Z465 357 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 TMEM179BQ7Z7N9 219 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 PPTC7Q8NI37 304 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 MUL1Q969V5 352 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 TRMOQ9BU70 441 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 YTHDF1Q9BYJ9 559 aaKnown RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ERVK-11Q9UQG0 969 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 GPR32O75388 356 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 S1PR4O95977 384 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 SMIM10L2AP0DMW4 78 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 SMIM10L2BP0DMW5 78 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 GTF2E2P29084 291 aaKnown RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 DSC2Q02487 901 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 RBBP7Q16576 425 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 FAM98BQ52LJ0 330 aaKnown RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 SDHAF4Q5VUM1 108 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 POC5Q8NA72 575 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 C3orf58Q8NDZ4 430 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 BLOC1S5Q8TDH9 187 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 DPF3Q92784 378 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 L3HYPDHQ96EM0 354 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 PCED1BQ96HM7 432 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ZNF641Q96N77 438 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 GAD1Q99259 594 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 THUMPD3Q9BV44 507 aaKnown RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 GALPQ9UBC7 116 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 ITGB1BP2Q9UKP3 347 aa13.01□□□□□ -0.33
TRIM3-203ENST00000525074 UBQLN1Q9UMX0 589 aaKnown RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 CAB39Q9Y376 341 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-203ENST00000525074 PIRO00625 290 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 GSTA4O15217 222 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 SPNP16150 400 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 ADRA1AP35348 466 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 ZFP36L2P47974 494 aaKnown RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 NEK2P51955 445 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 TSNQ15631 228 aaKnown RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 ATP6AP1LQ52LC2 224 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 IRAK1BP1Q5VVH5 260 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 KANK2Q63ZY3 851 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 RIMKLAQ8IXN7 391 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 TMEM199Q8N511 208 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 RORBQ92753 470 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 TP63Q9H3D4 680 aaPredicted RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 ANKMY1Q9P2S6 941 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 ZNF639Q9UID6 485 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 ASB1Q9Y576 335 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 CDC7O00311 574 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 PDHXO00330 501 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 CDH1P12830 882 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 CLCNKBP51801 687 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 RAPSNQ13702 412 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 SEMA3AQ14563 771 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 IHHQ14623 411 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 TRIP4Q15650 581 aaPredicted RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 RBM48Q5RL73 367 aaKnown RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 SPATC1Q76KD6 591 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 PTRH1Q86Y79 214 aaKnown RBP13□□□□□ -0.33
TRIM3-203ENST00000525074 OR10A6Q8NH74 314 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 FAR1Q8WVX9 515 aa13□□□□□ -0.33
TRIM3-203ENST00000525074 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms