RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	NTAN1	Q96AB6	310 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	OXNAD1	Q96HP4	312 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	ITCH	Q96J02	903 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SPATA13	Q96N96	652 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	KLHL5	Q96PQ7	755 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SLC2A13	Q96QE2	648 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ZCWPW1	Q9H0M4	648 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	OSGEPL1	Q9H4B0	414 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ELAC1	Q9H777	363 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	PNPLA8	Q9NP80	782 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	LIMD1	Q9UGP4	676 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	TSR3	Q9UJK0	312 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	HAO1	Q9UJM8	370 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	LEF1	Q9UJU2	399 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	PIGBOS1	A0A0B4J2F0	54 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	LINC00854	A0A1B0GVQ3	168 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MYBPHL	A2RUH7	354 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ARHGEF33	A8MVX0	844 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226		M0QZQ0	153 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	AGRP	O00253	132 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	AP3D1	O14617	1153 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	DNAJA2	O60884	412 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	TMCC2	O75069	709 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MAP3K6	O95382	1288 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CER1	O95813	267 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	IGSF6	O95976	241 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CHRNG	P07510	517 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ENO2	P09104	434 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	ZCCHC18	P0CG32	403 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	THRB	P10828	461 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	PCNA	P12004	261 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	PTX3	P26022	381 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	GABRR2	P28476	465 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CTGF	P29279	349 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SDC2	P34741	201 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ELK3	P41970	407 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	PIK3CB	P42338	1070 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SLC1A6	P48664	564 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CDK9	P50750	372 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	PDX1	P52945	283 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SLC5A3	P53794	718 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	PSME3	P61289	254 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	NKX3-2	P78367	333 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SMAD3	P84022	425 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	CCNI	Q14094	377 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	DPYS	Q14117	519 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	SPIDR	Q14159	915 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MYBPC3	Q14896	1274 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	NR1D2	Q14995	579 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CA9	Q16790	459 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	KCTD19	Q17RG1	926 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	LSM12	Q3MHD2	195 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	FGD3	Q5JSP0	725 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ANXA8L1	Q5VT79	327 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ZNF549	Q6P9A3	640 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	VSTM1	Q6UX27	236 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	BNIPL	Q7Z465	357 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	C11orf96	Q7Z7L8	435 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	AKAP14	Q86UN6	197 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	RELL1	Q8IUW5	271 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	FUK	Q8N0W3	1084 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	HMGB4	Q8WW32	186 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CPT1B	Q92523	772 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	FIG4	Q92562	907 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	NDRG1	Q92597	394 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	EFHD2	Q96C19	240 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	ERLEC1	Q96DZ1	483 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ZHX1-C8orf76	Q96EF9	292 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	VMP1	Q96GC9	406 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	ZIC5	Q96T25	663 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	KCNS3	Q9BQ31	491 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	TXLNGY	Q9BZA5	131 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	CRTAC1	Q9NQ79	661 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MIOS	Q9NXC5	875 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	EURL	Q9NYK6	297 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	DEC1	Q9P2X7	70 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	OR12D3	Q9UGF7	316 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MCM8	Q9UJA3	840 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	FBXW11	Q9UKB1	542 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	PRPF19	Q9UMS4	504 aa	Known RBP	2.57	□□□□□ -2
PCM1-222	ENST00000524226	PHF24	Q9UPV7	400 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	GPSM3	Q9Y4H4	160 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226		V9GYQ6	96 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	KAT6A	Q92794	2004 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226	MCM3AP	O60318	1980 aa		2.57	□□□□□ -2
PCM1-222	ENST00000524226		A0A1W2PQH9	124 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	C5orf60	A6NFR6	353 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	NEMP2	A6NFY4	417 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	LOC110117498-PIK3R3	F6TDL0	507 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	WRB	O00258	174 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SLC28A1	O00337	649 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KPNA3	O00505	521 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	GABRD	O14764	452 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZBTB14	O43829	449 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MFSD11	O43934	449 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PMPCB	O75439	489 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KHDRBS3	O75525	346 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	TCEA3	O75764	348 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	WFS1	O76024	890 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CCNDBP1	O95273	360 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms