RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PDS5AQ29RF7 1337 aaKnown RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GPR75-ASB3A0A0A6YYF3 556 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LILRA5A6NI73 299 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ANKRD66B4E2M5 251 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 TSPAN1O60635 241 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 CAMTA2O94983 1202 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 NTN1O95631 604 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 APOA4P06727 396 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LINC00271P0C7V0 271 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ZNF12P17014 697 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 IL11P20809 199 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 NMBRP28336 390 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 CCKBRP32239 447 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ART1P52961 327 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ZXDBP98169 803 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 CXCL9Q07325 125 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GAGE2BQ13066 116 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 PLA2G7Q13093 441 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 FHL1Q13642 323 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GTF2H2Q13888 395 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 PSMD6Q15008 389 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 SNAPC1Q16533 368 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 IZUMO4Q1ZYL8 232 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 CCDC96Q2M329 555 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ASPRV1Q53RT3 343 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 NADSYN1Q6IA69 706 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 KRT80Q6KB66 452 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GAGE2AQ6NT46 116 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 GTF2H2CQ6P1K8 395 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LDB1Q86U70 411 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 KMT5CQ86Y97 462 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 C1orf52Q8N6N3 182 aaKnown RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 TBC1D16Q8TBP0 767 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 PTPMT1Q8WUK0 201 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 SLC38A5Q8WUX1 472 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LPGAT1Q92604 370 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 ABTB1Q969K4 478 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 ZNF653Q96CK0 615 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 CAMK1GQ96NX5 476 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 MEIS3Q99687 375 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 BAG1Q99933 345 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 SLCO5A1Q9H2Y9 848 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 WSB2Q9NYS7 404 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 SELENONQ9NZV5 590 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 RCC2Q9P258 522 aaKnown RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 NFKBIL1Q9UBC1 381 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 DDX25Q9UHL0 483 aaKnown RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 B3GALT5Q9Y2C3 310 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 TMEM184BQ9Y519 407 aaPredicted RBP3.82□□□□□ -1.8
SKP1-212ENST00000523966 TRPV2Q9Y5S1 764 aa3.82□□□□□ -1.8
SKP1-212ENST00000523966 LOC102723996A0A087X1L8 192 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 A0A1W2PR77 199 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 PLSCR5A0PG75 271 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 DENND3A2RUS2 1198 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 MAGEB17A8MXT2 336 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ZNHIT1O43257 154 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SMAD6O43541 496 aaKnown RBP3.81□□□□□ -1.8
SKP1-212ENST00000523966 DKC1O60832 514 aaKnown RBP eCLIP3.81□□□□□ -1.8
SKP1-212ENST00000523966 EIF5BO60841 1220 aaKnown RBP3.81□□□□□ -1.8
SKP1-212ENST00000523966 BMP10O95393 424 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ADRB2P07550 413 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 MYBL1P10243 752 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 TGFB3P10600 412 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 MLLT10P55197 1068 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SLC20A2Q08357 652 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ZNF234Q14588 700 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ADALQ6DHV7 355 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 UNQ6126/PRO20091Q6UXV3 157 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 GALNT13Q8IUC8 556 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ZDHHC17Q8IUH5 632 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 CEP97Q8IW35 865 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.81□□□□□ -1.8
SKP1-212ENST00000523966 FBXO39Q8N4B4 442 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 AFAP1Q8N556 730 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 OR5R1Q8NH85 324 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 LILRB1Q8NHL6 650 aaPredicted RBP3.81□□□□□ -1.8
SKP1-212ENST00000523966 SLC20A1Q8WUM9 679 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 TMEM255BQ8WV15 326 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SLC44A1Q8WWI5 657 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 PHF21AQ96BD5 680 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 DGAT2Q96PD7 388 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 NEK1Q96PY6 1258 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SERINC2Q96SA4 455 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 SYT17Q9BSW7 474 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 AP1M1Q9BXS5 423 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 MOV10L1Q9BXT6 1211 aaKnown RBP3.81□□□□□ -1.8
SKP1-212ENST00000523966 SEMA6AQ9H2E6 1030 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 FKRPQ9H9S5 495 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 TMEM30AQ9NV96 361 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 ZHX1Q9UKY1 873 aaPredicted RBP3.81□□□□□ -1.8
SKP1-212ENST00000523966 PADI3Q9ULW8 664 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 YIPF1Q9Y548 306 aa3.81□□□□□ -1.8
SKP1-212ENST00000523966 TCRBV21S2A2A0A5A6 115 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 OR5K3A6NET4 321 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 SSX4O60224 188 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms