RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 SMARCE1Q969G3 411 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RELTQ969Z4 430 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 MVB12AQ96EY5 273 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 ATXN7L3BQ96GX2 97 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 HIC2Q96JB3 615 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CCDC114Q96M63 670 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 MED15Q96RN5 788 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PPP1R9BQ96SB3 815 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PRMT1Q99873 361 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 DPYSL5Q9BPU6 564 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 FEM1AQ9BSK4 669 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SCAND2PQ9GZW5 306 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 INTS2Q9H0H0 1204 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 THAP9Q9H5L6 903 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 POLR1BQ9H9Y6 1135 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PREBQ9HCU5 417 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 UBE2TQ9NPD8 197 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 THSD1Q9NS62 852 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SATB2Q9UPW6 733 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SIK3Q9Y2K2 1263 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SNX10Q9Y5X0 201 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CFAP20Q9Y6A4 193 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 LY6G6EA0A0G2JKS1 128 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 A6NNZ2 444 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 CYSRT1A8MQ03 144 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 K7ESM1 405 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 M0QYT0 321 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 RNF103O00237 685 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SCAMP1O15126 338 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 MUSKO15146 869 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ALOX15BO15296 676 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 RAD51BO15315 384 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SMAD6O43541 496 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SGTAO43765 313 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SLC28A2O43868 658 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 CLDN11O75508 207 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 CNTN5O94779 1100 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PAK4O96013 591 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 IGLV3-25P01717 112 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GIMD1P0DJR0 217 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SRCP12931 536 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 C6P13671 934 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 TGM2P21980 687 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PTPN7P35236 360 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 RPS19P39019 145 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PLK1P53350 603 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 STX17P56962 302 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 RNASE9P60153 205 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ERVPABLB-1P60509 514 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 HNRNPKP61978 463 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 KRT83P78385 493 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GCNT1Q02742 428 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 CCDC15Q0P6D6 951 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PDCLQ13371 301 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PDE1CQ14123 709 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ZNF267Q14586 743 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 DRAP1Q14919 205 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ISXQ2M1V0 245 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PGS1Q32NB8 556 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ALFQ53S48 1182 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GUSBP11Q6P575 273 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GJB7Q6PEY0 223 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GCNT7Q6ZNI0 430 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ERN2Q76MJ5 926 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 TFAP2DQ7Z6R9 452 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 TMEM110Q86TL2 294 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 TTC7BQ86TV6 843 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 DRC7Q8IY82 874 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GPR135Q8IZ08 494 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 RYBPQ8N488 228 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 OR2A12Q8NGT7 310 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 LMO3Q8TAP4 145 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 NELFBQ8WX92 580 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ZNF606Q8WXB4 792 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 FAM131CQ96AQ9 280 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 C1GALT1C1Q96EU7 318 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ALG14Q96F25 216 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 PPP1R13BQ96KQ4 1090 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 GSDMAQ96QA5 445 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 CRACR2AQ9BSW2 395 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 TRIM4Q9C037 500 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ENKD1Q9H0I2 346 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 SYNCQ9H7C4 482 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 LANCL2Q9NS86 450 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 NLGN3Q9NZ94 848 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 IL36AQ9UHA7 158 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 VPS51Q9UID3 782 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ZFR2Q9UPR6 939 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ATP6V1DQ9Y5K8 247 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 HS3ST4Q9Y661 456 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 U3KQA8 63 aa5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 ASH1LQ9NR48 2969 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-239ENST00000523685 KALRNO60229 2985 aa5.31□□□□□ -1.56
CTNNA1-239ENST00000523685 A0A0D9SEW6 157 aa5.31□□□□□ -1.56
CTNNA1-239ENST00000523685 A0A1W2PNU3 283 aaPredicted RBP5.31□□□□□ -1.56
CTNNA1-239ENST00000523685 NPEPPSL1A6NEC2 478 aa5.31□□□□□ -1.56
CTNNA1-239ENST00000523685 POM121BA6NF01 834 aa5.31□□□□□ -1.56
CTNNA1-239ENST00000523685 VSTM5A8MXK1 200 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms