RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 GCNT7Q6ZNI0 430 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 Q6ZSR6 202 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 SLC26A11Q86WA9 606 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 SPATA6LQ8N4H0 392 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 OR13H1Q8NG92 308 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 SLC44A1Q8WWI5 657 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.22□□□□□ -0.453e-7■□□□□ 8.8
PABPC1-219ENST00000522387 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ELMO2Q96JJ3 720 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 FSCN3Q9NQT6 498 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 RIMKLBQ9ULI2 386 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 PLXNB3Q9ULL4 1909 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 PI4KAP42356 2102 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 HMX2A2RU54 273 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 GSTA2P09210 222 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 CHRM3P20309 590 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ATP5DP30049 168 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 CSNK1EP49674 416 aaKnown RBP12.22□□□□□ -0.45
PABPC1-219ENST00000522387 NCALDP61601 193 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 CREB5Q02930 508 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ZDHHC20Q5W0Z9 365 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ZC3HC1Q86WB0 502 aaKnown RBP12.22□□□□□ -0.45
PABPC1-219ENST00000522387 TRAPPC5Q8IUR0 188 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 PHYKPLQ8IUZ5 450 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-219ENST00000522387 DCUN1D1Q96GG9 259 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 C1QTNF7Q9BXJ2 289 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 ZNHIT2Q9UHR6 403 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 DNAJC16Q9Y2G8 782 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 MUC6Q6W4X9 2439 aa12.22□□□□□ -0.45
PABPC1-219ENST00000522387 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
PABPC1-219ENST00000522387 FUCA1P04066 466 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 ITGA2BP08514 1039 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 C7P10643 843 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.45
PABPC1-219ENST00000522387 TSHRP16473 764 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 AKT2P31751 481 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 GP5P40197 560 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 CD151P48509 253 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 RIPK1Q13546 671 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 ENPP7Q6UWV6 458 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 CNTN4Q8IWV2 1026 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 LPGAT1Q92604 370 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 BIRC8Q96P09 236 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 CPNE1Q99829 537 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 ORAI3Q9BRQ5 295 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 CLPBQ9H078 707 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 PNMA8BQ9ULN7 279 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-219ENST00000522387 CABIN1Q9Y6J0 2220 aa12.21□□□□□ -0.45
PABPC1-219ENST00000522387 EP300Q09472 2414 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 RGSL1A5PLK6 1076 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PRAMEF26H0Y7S4 382 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PHGDHO43175 533 aaKnown RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 ZNF8P17098 575 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PSMA3P25788 255 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 LEPRP48357 1165 aaKnown RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 THOP1P52888 689 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 CDKN2DP55273 166 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 KCNJ2P63252 427 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 GALNTL6Q49A17 601 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PPM1JQ5JR12 505 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 CTSL3PQ5NE16 218 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 LPCAT2Q7L5N7 544 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 SLC22A18ASQ8N1D0 253 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 DCLK2Q8N568 766 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 TMEM145Q8NBT3 493 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 LKAAEAR1Q8TD35 194 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 GAB3Q8WWW8 586 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 FOXJ1Q92949 421 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 RBBP8Q99708 897 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 OLFM1Q99784 485 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 CCDC68Q9H2F9 335 aa12.21□□□□□ -0.46
PABPC1-219ENST00000522387 PSMC3IPQ9P2W1 217 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.46
PABPC1-219ENST00000522387 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 AGAP14A8MT82 685 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 E5RI56 91 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 HGSO14964 777 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-219ENST00000522387 TCEA3O75764 348 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 THEGLP0DJG4 465 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 ATP1B2P14415 290 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-219ENST00000522387 ZNF7P17097 686 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-219ENST00000522387 TRIM23P36406 574 aa12.2□□□□□ -0.46
PABPC1-219ENST00000522387 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-219ENST00000522387 USP10Q14694 798 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms