RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 TMEM220Q6QAJ8 160 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 RD3Q7Z3Z2 195 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 UNC5BQ8IZJ1 945 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 C2CD4AQ8NCU7 369 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-203ENST00000520700 LPGAT1Q92604 370 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 LRRC61Q9BV99 259 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 BOCQ9BWV1 1114 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 TCEAL2Q9H3H9 227 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-203ENST00000520700 RXFP3Q9NSD7 469 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 ZNHIT2Q9UHR6 403 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 GVINP1Q7Z2Y8 2422 aa17.17■□□□□ 0.34
TRAM1-203ENST00000520700 TCRBV9S1A1TA0A576 114 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 GOLGA8KD6RF30 607 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 LMO7DNF2Z398 122 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 GOLGA8TH3BQL2 631 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 SCAMP1O15126 338 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 AQP9O43315 295 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 C1QAP02745 245 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 CTSEP14091 401 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 GNPDA1P46926 289 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 PRLHRP49683 370 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 CTSCP53634 463 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 DMPKQ09013 629 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 KYNUQ16719 465 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 PRRT3Q5FWE3 981 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF470Q6ECI4 717 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 MARK2Q7KZI7 788 aaKnown RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 TRMT10CQ7L0Y3 403 aaKnown RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 SLC26A11Q86WA9 606 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 SLC25A45Q8N413 288 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF548Q8NEK5 533 aaPredicted RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 SGF29Q96ES7 293 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 GSDMCQ9BYG8 508 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 CLPBQ9H078 707 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 TMEM168Q9H0V1 697 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 IARS2Q9NSE4 1012 aaKnown RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 NSMCE4AQ9NXX6 385 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 NINJ2Q9NZG7 142 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 MOSPD1Q9UJG1 213 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 RAB21Q9UL25 225 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 PCDHB1Q9Y5F3 818 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 PCYT1BQ9Y5K3 369 aaPredicted RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 USP34Q70CQ2 3546 aa17.16■□□□□ 0.34
TRAM1-203ENST00000520700 PTPRZ1P23471 2315 aaPredicted RBP17.16■□□□□ 0.34
TRAM1-203ENST00000520700 FAM159BA6NKW6 160 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 H3BMM5 538 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 OR1I1O60431 355 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 POP7O75817 140 aaKnown RBP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 ESR1P03372 595 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 GIMD1P0DJR0 217 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 MYBL2P10244 700 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 ARHGAP8P85298 464 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 CTBSQ01459 385 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 ILF3Q12906 894 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF658BQ4V348 819 aaPredicted RBP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 LDB1Q86U70 411 aaPredicted RBP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 GKN2Q86XP6 184 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 NRROSQ86YC3 692 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 OR2L2Q8NH16 312 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 CCDC97Q96F63 343 aaPredicted RBP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 BIRC8Q96P09 236 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
TRAM1-203ENST00000520700 GPSM3Q9Y4H4 160 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 COMMD10Q9Y6G5 202 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 LAMA1P25391 3075 aa17.15■□□□□ 0.34
TRAM1-203ENST00000520700 LRP4O75096 1905 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 MGAT4DA6NG13 374 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 FAM153BP0C7A2 387 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 STX2P32856 288 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 PHBP35232 272 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 SLC1A2P43004 574 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 VSNL1P62760 191 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 CTBP1Q13363 440 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 NAB1Q13506 487 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 FAM153CQ494X1 144 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 OGFOD3Q6PK18 319 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 WASH2PQ6VEQ5 465 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 CHST15Q7LFX5 561 aaPredicted RBP17.14■□□□□ 0.33
TRAM1-203ENST00000520700 AMZ2Q86W34 360 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 CLDN19Q8N6F1 224 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 LMX1AQ8TE12 382 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 CDKL2Q92772 493 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 CCM2Q9BSQ5 444 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 VPS37BQ9H9H4 285 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 WASH6PQ9NQA3 447 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 LATS2Q9NRM7 1088 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 UCKL1Q9NWZ5 548 aa17.14■□□□□ 0.33
TRAM1-203ENST00000520700 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms