RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CLYBLQ8N0X4 340 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 AHI1Q8N157 1196 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PGBD5Q8N414 524 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SLC25A41Q8N5S1 370 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PHC3Q8NDX5 983 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 BRSK1Q8TDC3 778 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 LINC01599Q8WXQ3 324 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 OVCA2Q8WZ82 227 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ZUFSPQ96AP4 578 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ROPN1LQ96C74 230 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TOX2Q96NM4 488 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CATSPER2Q96P56 530 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TUBGCP5Q96RT8 1024 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ATOH8Q96SQ7 321 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CDK5RAP1Q96SZ6 601 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 CDRT15Q96T59 188 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SLX1AQ9BQ83 275 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MGME1Q9BQP7 344 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 GPATCH1Q9BRR8 931 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 TMEM175Q9BSA9 504 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 AARSD1Q9BTE6 412 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 SLC25A23Q9BV35 468 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ERVK-6Q9BXR3 956 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 NUSAP1Q9BXS6 441 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 SEZ6LQ9BYH1 1024 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 DERL2Q9GZP9 239 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 POLR1EQ9GZS1 481 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 Q9H521 79 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 POMKQ9H5K3 350 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 KCNK12Q9HB15 430 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SP110Q9HB58 689 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CYP4F11Q9HBI6 524 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 NT5MQ9NPB1 228 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 POLR3BQ9NW08 1133 aaPredicted RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 CACNA2D2Q9NY47 1150 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MPP6Q9NZW5 540 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 GMIPQ9P107 970 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ABCD2Q9UBJ2 740 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TMED5Q9Y3A6 229 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 DTNAQ9Y4J8 743 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TRAF6Q9Y4K3 522 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SCN8AQ9UQD0 1980 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PLXNA4Q9HCM2 1894 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 LCHNA4D1U4 455 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 MTMR11A4FU01 709 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 STX16-NPEPL1H3BU86 382 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 H7C0S8 307 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 J3KR12 359 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 PSMD12O00232 456 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 FBP2O00757 339 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 NEMP1O14524 444 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 UBFD1O14562 309 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 STX16O14662 325 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 AIM2O14862 343 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 UBDO15205 165 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 RAMP2O60895 175 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ZMPSTE24O75844 475 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CNTN5O94779 1100 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 SLITRK5O94991 958 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 VNN2O95498 520 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 NDST3O95803 873 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CBX7O95931 251 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 EIF2S1P05198 315 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 SNRPB2P08579 225 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 RPS17P08708 135 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 F7P08709 466 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 CKBP12277 381 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 MTHFD2P13995 350 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ZNF24P17028 368 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ZNF26P17031 533 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 ZNF37AP17032 561 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 GPX3P22352 226 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 YWHAQP27348 245 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 HOXD9P28356 352 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 SLC7A1P30825 629 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CD86P42081 329 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 MAPK8P45983 427 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 GLRBP48167 497 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 TRPC1P48995 793 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CLCN4P51793 760 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CLCN7P51798 805 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 NEK2P51955 445 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ZNF140P52738 457 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 CHN2P52757 468 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ADARP55265 1226 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 CDH4P55283 916 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 C1QTNF8P60827 252 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ATP6V0D1P61421 351 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 TXNL4AP83876 142 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 RHDQ02161 417 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 DSC2Q02487 901 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CACNB2Q08289 660 aaPredicted RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 ELAVL2Q12926 359 aaKnown RBP5.01□□□□□ -1.61
SDC2-204ENST00000519914 GPR17Q13304 367 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 ART3Q13508 389 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 PEX6Q13608 980 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 APOFQ13790 326 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 CSHL1Q14406 222 aa5.01□□□□□ -1.61
SDC2-204ENST00000519914 POLD3Q15054 466 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms