RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SSPNQ14714 243 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 UGP2Q16851 508 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 MARK2Q7KZI7 788 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 TRIM74Q86UV6 250 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 TMEM126BQ8IUX1 230 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 ATP6V0D2Q8N8Y2 350 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 SIDT2Q8NBJ9 832 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 MAPK1IP1LQ8NDC0 245 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 GOT1L1Q8NHS2 421 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 PPM1MQ96MI6 270 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 CISHQ9NSE2 258 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 BEX4Q9NWD9 120 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 CBLCQ9ULV8 474 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 ASB1Q9Y576 335 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 RYR2Q92736 4967 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 SPTBP11277 2137 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 RYR1P21817 5038 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 ARID1AO14497 2285 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 SYNJ2BP-COX16A0A087WUM0 186 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 A8MX80 341 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 CLDN4O14493 209 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 MAPK13O15264 365 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 KLHL41O60662 606 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 KLK3P07288 261 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 TNFAIP3P21580 790 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 UBA7P41226 1012 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 ARSEP51690 589 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 GSDMDP57764 484 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 SLC20A2Q08357 652 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 AIMP2Q13155 320 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 ALCAMQ13740 583 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 INAQ16352 499 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 OTUD1Q5VV17 481 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 HEPHL1Q6MZM0 1159 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 RFLNAQ6ZTI6 216 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 TMEM26Q6ZUK4 368 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 YTHDF3Q7Z739 585 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 GUF1Q8N442 669 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 FBXO18Q8NFZ0 1043 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 THAP3Q8WTV1 239 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 SHC3Q92529 594 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 PSMF1Q92530 271 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 SEMA4DQ92854 862 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 MAGED4Q96JG8 741 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 CALR3Q96L12 384 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 COQ10AQ96MF6 247 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 GPR137Q96N19 417 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 MAP3K3Q99759 626 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 OSBPL1AQ9BXW6 950 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 TM6SF1Q9BZW5 370 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 EPB41L1Q9H4G0 881 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 KCNJ16Q9NPI9 418 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 KCND1Q9NSA2 647 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 SAMSN1Q9NSI8 373 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 PANK4Q9NVE7 773 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 COX16Q9P0S2 106 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 ZNF624Q9P2J8 865 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 NOL7Q9UMY1 257 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 KCNK6Q9Y257 313 aa6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 PTRH2Q9Y3E5 179 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-216ENST00000519489 TRAV17A0A0B4J275 112 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ILVBLA1L0T0 632 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 AGPSO00116 658 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 PEX12O00623 359 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 IKBKBO14920 756 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 DYRK3O43781 588 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 RASAL1O95294 804 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 JCHAINP01591 159 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 CBSLP0DN79 551 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 PYGMP11217 842 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 CBSP35520 551 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 PIK3CAP42336 1068 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 CAPZBP47756 277 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 TUBB4BP68371 445 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ELP6Q0PNE2 266 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 OLIG2Q13516 323 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 TUBB2AQ13885 445 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 PTPRRQ15256 657 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 PCSK7Q16549 785 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 UBAP2Q5T6F2 1119 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 AFMIDQ63HM1 303 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 RETSATQ6NUM9 610 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 IRGCQ6NXR0 463 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ARSKQ6UWY0 536 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ISLR2Q6UXK2 745 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 SETD3Q86TU7 594 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 LIX1LQ8IVB5 337 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 SIAH3Q8IW03 269 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 NELFCDQ8IXH7 590 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 D2HGDHQ8N465 521 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 OR1L3Q8NH93 324 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 SNX21Q969T3 373 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms