RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ZMAT1Q5H9K5 638 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARMCX4Q5H9R4 360 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MIIPQ5JXC2 388 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM83BQ5T0W9 1011 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 INTS11Q5TA45 600 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SWSAP1Q6NVH7 229 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 FUT10Q6P4F1 479 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CNSTQ6PJW8 725 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF773Q6PK81 442 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 C5orf46Q6UWT4 87 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZBTB49Q6ZSB9 765 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 USP45Q70EL2 814 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HTR3DQ70Z44 454 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PGAP1Q75T13 922 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RTL10Q7L3V2 364 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARCQ7LC44 396 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 STRA8Q7Z7C7 330 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASPGQ86U10 573 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLCO6A1Q86UG4 719 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZC3H7AQ8IWR0 971 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEFF1Q8IYR6 380 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 LGI2Q8N0V4 545 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 KRT78Q8N1N4 520 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SCML4Q8N228 414 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF786Q8N393 782 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 NKAIN3Q8N8D7 197 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 NAT16Q8N8M0 369 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 DTX3Q8N9I9 347 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC37A3Q8NCC5 494 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPHLN1Q8NEY8 458 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 LPCAT1Q8NF37 534 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR7A2PQ8NGA2 310 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR6Q1Q8NGQ2 317 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 WDR48Q8TAF3 677 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 URGCPQ8TCY9 931 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCP10LQ8TDR4 215 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HEXDCQ8WVB3 486 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 STON2Q8WXE9 905 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SNX19Q92543 992 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RPL3LQ92901 407 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 COPS5Q92905 334 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 USP13Q92995 863 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MARC2Q969Z3 335 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 C18orf25Q96B23 403 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ELMO2Q96JJ3 720 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 FEM1CQ96JP0 617 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CNDP1Q96KN2 507 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 C7orf34Q96L11 122 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HYLS1Q96M11 299 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 GLT1D1Q96MS3 346 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SERINC2Q96SA4 455 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCM2Q9BSQ5 444 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MTG1Q9BT17 334 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASPSCR1Q9BZE9 553 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 NMUR2Q9GZQ4 415 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC22A4Q9H015 551 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 C11orf49Q9H6J7 331 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SYNDIG1Q9H7V2 258 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 COG4Q9H9E3 785 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HPF1Q9NWY4 346 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CMTM6Q9NX76 183 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERAP1Q9NZ08 941 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 BFARQ9NZS9 450 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAD2L2Q9UI95 211 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PHF11Q9UIL8 331 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RIMS3Q9UJD0 308 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRHDEQ9UKU6 1024 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDC14AQ9UNH5 594 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNK7Q9Y2U2 307 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF11Q9Y3C5 154 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 A0A1B0GUL6 1792 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 VWDEQ8N2E2 1590 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARHGAP5Q13017 1502 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 NEXMIFQ5QGS0 1516 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRAV20A0A0B4J274 112 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRSS51A0A1B0GVH4 220 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCDC78A2IDD5 438 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 OTOL1A6NHN0 477 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 POC1B-GALNT4F8VUJ3 575 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 H0YAE9 185 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRAF5O00463 557 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CTDSP2O14595 271 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 AIM2O14862 343 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM24O15164 1050 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 INPPL1O15357 1258 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PSTPIP1O43586 416 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 USP12O75317 370 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPM1BO75688 479 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 UGT2B17O75795 530 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 BCAS2O75934 225 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL18RAPO95256 599 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PIGNO95427 931 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CRYABP02511 175 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TNNC2P02585 160 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 MT-ND3P03897 115 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms