RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PLIN5Q00G26 463 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 LGALS3BPQ08380 585 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 PLA2G7Q13093 441 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 TRA2AQ13595 282 aaKnown RBP eCLIP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ACVR2BQ13705 512 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 UBE4AQ14139 1066 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ODF1Q14990 250 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 LTB4RQ15722 352 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 MTHFSDQ2M296 383 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 EIF2S3LQ2VIR3 472 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 TIMM50Q3ZCQ8 353 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 C3orf38Q5JPI3 329 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 AGAP7PQ5VUJ5 663 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 PGBD2Q6P3X8 592 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 DARS2Q6PI48 645 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 KLHL17Q6TDP4 642 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF704Q6ZNC4 412 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 LRRC8DQ7L1W4 858 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ABHD12BQ7Z5M8 362 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 NOXA1Q86UR1 476 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZFAND4Q86XD8 727 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 FMNL3Q8IVF7 1028 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 BRSK2Q8IWQ3 736 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 UBR7Q8N806 425 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC43A3Q8NBI5 491 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZMIZ2Q8NF64 920 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 OR2T12Q8NG77 320 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 HMGCLL1Q8TB92 370 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SMAP2Q8WU79 429 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC44A1Q8WWI5 657 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SUSD6Q92537 303 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 DYRK2Q92630 601 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 RANBP9Q96S59 729 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 MAP3K3Q99759 626 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 UBAC1Q9BSL1 405 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CCDC28BQ9BUN5 200 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 VCXQ9H320 206 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ESRP2Q9H6T0 727 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZMAT3Q9HA38 289 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 TCP11L1Q9NUJ3 509 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC38A7Q9NVC3 462 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CISD1Q9NZ45 108 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 NLKQ9UBE8 527 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 RAB21Q9UL25 225 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 PADI3Q9ULW8 664 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 PAXBP1Q9Y5B6 917 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SEC23IPQ9Y6Y8 1000 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SPATA31D1Q6ZQQ2 1576 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 MUC2Q02817 5179 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 IGHV4-30-2A0A087WSY4 118 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 CCDC194A0A1B0GVG4 234 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 A0A1W2PPK0 400 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GSAPA4D1B5 854 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 MFSD2BA6NFX1 497 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 USP27XA6NNY8 438 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 C17orf100A8MU93 164 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC25A17O43808 307 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 INMTO95050 263 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ITGA5P08648 1049 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 CGB7P0DN87 165 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATP1A3P13637 1013 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ANPEPP15144 967 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 DDX5P17844 614 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 LGALS3P17931 250 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 SRD5A1P18405 259 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 AKAP5P24588 427 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 BDKRB2P30411 391 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GRK5P34947 590 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 PIK3CBP42338 1070 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ERVPABLB-1P60509 514 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 RPS16P62249 146 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GPR17Q13304 367 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 UNC119Q13432 240 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GPNMBQ14956 572 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ESCO2Q56NI9 601 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 LEMD1Q68G75 181 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 CGB2Q6NT52 195 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 KIAA1324Q6UXG2 1013 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 DDX46Q7L014 1031 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 C5orf24Q7Z6I8 188 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 PIGZQ86VD9 579 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 LONP2Q86WA8 852 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 AMIGO1Q86WK6 493 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 CATSPERDQ86XM0 798 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 HIPK1Q86Z02 1210 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 VPS52Q8N1B4 723 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GALNT15Q8N3T1 639 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 PARP16Q8N5Y8 322 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ENDOVQ8N8Q3 282 aaKnown RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 SCAIQ8N9R8 606 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GLIS1Q8NBF1 620 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 GTSF1Q8WW33 167 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF486Q96H40 463 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 IMMP1LQ96LU5 166 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 LGMNQ99538 433 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 CGRRF1Q99675 332 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATF6BQ99941 703 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 KATNAL1Q9BW62 490 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 STRA6Q9BX79 667 aa-0.96□□□□□ -2.56
RNU6-542P-201ENST00000516405 MED20Q9H944 212 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms