RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 HLTFQ14527 1009 aaKnown RBP eCLIP25.56■■□□□ 1.68
DDR1-279ENST00000515529 DBN1Q16643 649 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 PERM1Q5SV97 790 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 CERS6Q6ZMG9 384 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 PIANPQ8IYJ0 282 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 NAGSQ8N159 534 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 SNF8Q96H20 258 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 CCDC3Q9BQI4 270 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 STN1Q9H668 368 aaKnown RBP25.56■■□□□ 1.68
DDR1-279ENST00000515529 VPS37BQ9H9H4 285 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 TREX1Q9NSU2 369 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 CATSPERZQ9NTU4 200 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 LRIT1Q9P2V4 623 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 TBC1D29Q9UFV1 150 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 MAD1L1Q9Y6D9 718 aa25.56■■□□□ 1.68
DDR1-279ENST00000515529 FAM187AA6NFU0 413 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 SMAPO00193 183 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 ZW10O43264 779 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 OPA1O60313 960 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 ITIH4Q14624 930 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 MORF4L2Q15014 288 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 WHAMMP3Q1A5X7 153 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 BCL7AQ4VC05 210 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 DNAJC21Q5F1R6 531 aaKnown RBP25.55■■□□□ 1.68
DDR1-279ENST00000515529 SFTPA2Q8IWL1 248 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 MPP5Q8N3R9 675 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 ARL14Q8N4G2 192 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 PATE1Q8WXA2 126 aa25.55■■□□□ 1.68
DDR1-279ENST00000515529 TRBV23OR9-2A0A075B6M9 112 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 KLHL33A6NCF5 533 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 OR5K4A6NMS3 321 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 F8W8V4 182 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 NUDT21O43809 227 aaKnown RBP25.54■■□□□ 1.68
DDR1-279ENST00000515529 F3P13726 295 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 NSG1P42857 185 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 B4GALNT1Q00973 533 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 SEPT7Q16181 437 aaKnown RBP25.54■■□□□ 1.68
DDR1-279ENST00000515529 HES3Q5TGS1 186 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 CES3Q6UWW8 571 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 MICALCLQ6ZW33 695 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 C11orf96Q7Z7L8 435 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 TMPRSS12Q86WS5 348 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 BEND7Q8N7W2 519 aaPredicted RBP25.54■■□□□ 1.68
DDR1-279ENST00000515529 AVL9Q8NBF6 648 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 WDR48Q8TAF3 677 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 MFSD3Q96ES6 412 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 SGSM3Q96HU1 749 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 SCNM1Q9BWG6 230 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 PRDM8Q9NQV8 689 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 RNF215Q9Y6U7 377 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 PLXNB3Q9ULL4 1909 aa25.54■■□□□ 1.68
DDR1-279ENST00000515529 IGLV3-16A0A075B6K0 115 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 KIR2DS5A0A0G2JLQ3 304 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 A0A0G2JNG1 304 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 KIR2DS3K7RE56 304 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 QSOX1O00391 747 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 TOP3BO95985 862 aaKnown RBP25.53■■□□□ 1.68
DDR1-279ENST00000515529 JUPP14923 745 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 KIR2DS5Q14953 304 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 SMAD1Q15797 465 aaKnown RBP25.53■■□□□ 1.68
DDR1-279ENST00000515529 SLC9B2Q86UD5 537 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 Q8N9G6 341 aaPredicted RBP25.53■■□□□ 1.68
DDR1-279ENST00000515529 BBOF1Q8ND07 529 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 KIF18AQ8NI77 898 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 NAT14Q8WUY8 206 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 ZNF669Q96BR6 464 aaPredicted RBP25.53■■□□□ 1.68
DDR1-279ENST00000515529 FAM8A1Q9UBU6 413 aa25.53■■□□□ 1.68
DDR1-279ENST00000515529 FAM237BA0A1B0GVD1 139 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 MGAT4DA6NG13 374 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 CD3EAPO15446 510 aaKnown RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 AP2A2O94973 939 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 VAPBO95292 243 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 PNLIPP16233 465 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 SPINK2P20155 84 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 IVDP26440 423 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 HALP42357 657 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 MAGEA3P43357 314 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 PRLHRP49683 370 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 ITGA8P53708 1063 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 INSM1Q01101 510 aaPredicted RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 TUBB2AQ13885 445 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 KIAA0930Q6ICG6 404 aaPredicted RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 IYDQ6PHW0 289 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 TMPRSS7Q7RTY8 843 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 ZNF572Q7Z3I7 529 aaPredicted RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 C17orf82Q86X59 251 aaPredicted RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 TRIM48Q8IWZ4 208 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 PDIK1LQ8N165 341 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 SFRP1Q8N474 314 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 SLC37A2Q8TED4 501 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 STAMBPL1Q96FJ0 436 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 TUBB2BQ9BVA1 445 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 KLK13Q9UKR3 277 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 RPS6KL1Q9Y6S9 549 aa25.52■■□□□ 1.68
DDR1-279ENST00000515529 ARHGEF17Q96PE2 2063 aaPredicted RBP25.52■■□□□ 1.68
DDR1-279ENST00000515529 PFDN6O15212 129 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 RAD51CO43502 376 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 SEC31AO94979 1220 aaKnown RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 EML2O95834 649 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 RPL10P27635 214 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms