RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 VPS35Q96QK1 796 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 REXO4Q9GZR2 422 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ACOT13Q9NPJ3 140 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CHST12Q9NRB3 414 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 BTBD3Q9Y2F9 522 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 NOSIPQ9Y314 301 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 PCDHGB6Q9Y5F9 930 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 DNAJC15Q9Y5T4 150 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 GPR45Q9Y5Y3 372 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 WDR81Q562E7 1941 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 NRCAMQ92823 1304 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 SNTNA6NMZ2 147 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 SPATA31C2B4DYI2 1134 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 KCNK1O00180 336 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 AZIN1O14977 448 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 MT-CO1P00395 513 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ITGB3P05106 788 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ITGA2P17301 1181 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 GGT5P36269 586 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 MAP2K4P45985 399 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ATXN1P54253 815 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 FCGRTP55899 365 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CCNA1P78396 465 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 SLC14A2Q15849 920 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 FUT11Q495W5 492 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 IER5Q5VY09 327 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ZNF438Q7Z4V0 828 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 NOXA1Q86UR1 476 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 GATAD2AQ86YP4 633 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 SYTL1Q8IYJ3 562 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 PYROXD2Q8N2H3 581 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 LINC00469Q8N7U9 141 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 NAT16Q8N8M0 369 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 TWIST2Q8WVJ9 160 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CCDC115Q96NT0 180 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 TDRD3Q9H7E2 651 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 PTPRHQ9HD43 1115 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ACOXLQ9NUZ1 547 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 PAQR5Q9NXK6 330 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 EHD3Q9NZN3 535 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 DOCK5Q9H7D0 1870 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 GNGT2O14610 69 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 CST1P01037 141 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 HGFP14210 728 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 TPH1P17752 444 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 GGT1P19440 569 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 GTF2E2P29084 291 aaKnown RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 TGFBR2P37173 567 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 CLCN5P51795 746 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 PGGT1BP53609 377 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 OR4D2P58180 307 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 HERVK_113P63132 956 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 GPR50Q13585 617 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 GRB7Q14451 532 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 UNC50Q53HI1 259 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 KANK2Q63ZY3 851 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 CES5AQ6NT32 575 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 XKRXQ6PP77 449 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 RAB44Q7Z6P3 723 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 HIPK1Q86Z02 1210 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 KLHDC8BQ8IXV7 354 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 MICU2Q8IYU8 434 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 PPHLN1Q8NEY8 458 aaKnown RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 ISG20Q96AZ6 181 aaKnown RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 TUBGCP3Q96CW5 907 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 PHF21BQ96EK2 531 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 ERVK-6Q9BXR3 956 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 ITPAQ9BY32 194 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 C12orf4Q9NQ89 552 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 TRAPPC4Q9Y296 219 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 V9GYQ6 96 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 DCLK1O15075 740 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 SGTAO43765 313 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 XPNPEP2O43895 674 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 HS6ST1O60243 411 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 KCNJ13O60928 360 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 MAFO75444 373 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-215ENST00000515385 UGT2B17O75795 530 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 PCNAP12004 261 aa12.68□□□□□ -0.38
SMAD1-215ENST00000515385 CYP2A7P20853 494 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms