RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GALNT13Q8IUC8 556 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 TRAPPC5Q8IUR0 188 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 CNPY4Q8N129 248 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 OXR1Q8N573 874 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 PAFAH2Q99487 392 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 RBBP8Q99708 897 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 DHRS4Q9BTZ2 278 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 ZDHHC5Q9C0B5 715 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 CYP4F12Q9HCS2 524 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 MRPL40Q9NQ50 206 aaKnown RBP20.69■□□□□ 0.9
LSM6-207ENST00000515311 SUFUQ9UMX1 484 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 PRSS21Q9Y6M0 314 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 TMEM131Q92545 1883 aa20.69■□□□□ 0.9
LSM6-207ENST00000515311 KLHL33A6NCF5 533 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 OR2AG2A6NM03 316 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 KMOO15229 486 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 GRID2O43424 1007 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 FTH1P02794 183 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 CSF2P04141 144 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 SHBGP04278 402 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 F7P08709 466 aaPredicted RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 PKMP14618 531 aaKnown RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 NME1P15531 152 aaKnown RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 HK3P52790 923 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 BNC1Q01954 994 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 PYCR3Q53H96 274 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 TRIM61Q5EBN2 209 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 CTSL3PQ5NE16 218 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 KCTD16Q68DU8 428 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 PTRHD1Q6GMV3 140 aaKnown RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 TMEM220Q6QAJ8 160 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 ZNF547Q8IVP9 402 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 TSACCQ96A04 125 aaPredicted RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 LINC00615Q96LM1 132 aaPredicted RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 TSSK1BQ9BXA7 367 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 CCDC68Q9H2F9 335 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 CARS2Q9HA77 564 aaKnown RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 FAM86C1Q9NVL1 165 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 ZNHIT2Q9UHR6 403 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 SLC24A2Q9UI40 661 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 ZNF180Q9UJW8 692 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 GMEB2Q9UKD1 530 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 PNMA8BQ9ULN7 279 aaPredicted RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 SNX11Q9Y5W9 270 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 DNMT3AQ9Y6K1 912 aaPredicted RBP20.68■□□□□ 0.9
LSM6-207ENST00000515311 IKBKGQ9Y6K9 419 aa20.68■□□□□ 0.9
LSM6-207ENST00000515311 USP34Q70CQ2 3546 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 RALGAPA1Q6GYQ0 2036 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 POC1B-GALNT4F8VUJ3 575 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 TCEA3O75764 348 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 LMNAP02545 664 aaKnown RBP20.67■□□□□ 0.9
LSM6-207ENST00000515311 INHBAP08476 426 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 FMO4P31512 558 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 SPRP35270 261 aaPredicted RBP20.67■□□□□ 0.9
LSM6-207ENST00000515311 MSH2P43246 934 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 GNPDA1P46926 289 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 LIMK2P53671 638 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 GRIK2Q13002 908 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 ZNF549Q6P9A3 640 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 FBXO38Q6PIJ6 1188 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 IL27RAQ6UWB1 636 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 HID1Q8IV36 788 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 PHACTR4Q8IZ21 702 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 VPS39Q96JC1 886 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 OR2M4Q96R27 311 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 TIMM29Q9BSF4 260 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 AARSD1Q9BTE6 412 aaKnown RBP20.67■□□□□ 0.9
LSM6-207ENST00000515311 TRNAU1APQ9NX07 287 aaKnown RBP20.67■□□□□ 0.9
LSM6-207ENST00000515311 DNAJC28Q9NX36 388 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 MOSPD1Q9UJG1 213 aa20.67■□□□□ 0.9
LSM6-207ENST00000515311 PCYT1BQ9Y5K3 369 aaPredicted RBP20.67■□□□□ 0.9
LSM6-207ENST00000515311 GPR179Q6PRD1 2367 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 PATE3B3GLJ2 98 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 PROB1E7EW31 1015 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 KHNYNO15037 678 aaKnown RBP20.66■□□□□ 0.9
LSM6-207ENST00000515311 DFNA5O60443 496 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 TNFP01375 233 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 SYPP08247 313 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 CNTFP26441 200 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 SERPINB9P50453 376 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 LRP8Q14114 963 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 RASA2Q15283 850 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 ZNF423Q2M1K9 1284 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 CRTC3Q6UUV7 619 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 TAOK1Q7L7X3 1001 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 C11orf96Q7Z7L8 435 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 DCAKDQ8WVC6 231 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 KCNJ9Q92806 393 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 PANX3Q96QZ0 392 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 CCM2Q9BSQ5 444 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 NUSAP1Q9BXS6 441 aaKnown RBP20.66■□□□□ 0.9
LSM6-207ENST00000515311 SLC13A1Q9BZW2 595 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 KLF15Q9UIH9 416 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 ZFC3H1O60293 1989 aaKnown RBP20.66■□□□□ 0.9
LSM6-207ENST00000515311 KNL1Q8NG31 2342 aa20.66■□□□□ 0.9
LSM6-207ENST00000515311 ADAMTS9Q9P2N4 1935 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 H3BM21 787 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 ARHGAP33O14559 1287 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 KCNJ13O60928 360 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 LRP3O75074 770 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms