RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 GLIS1Q8NBF1 620 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 AVL9Q8NBF6 648 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 OR10G6Q8NH81 332 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 PRR11Q96HE9 360 aaPredicted RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 C19orf43Q9BQ61 176 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 ASCL3Q9NQ33 180 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 CPNE7Q9UBL6 633 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 URB1O60287 2271 aaKnown RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 A0A087WV48 116 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 CCDC78A2IDD5 438 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 KCNJ13O60928 360 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 VIPP01282 170 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 JMJD7P0C870 316 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 HGFP14210 728 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 HOXB3P14651 431 aaPredicted RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 RPL22P35268 128 aaKnown RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 MAPK9P45984 424 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 KCNJ1P48048 391 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 GPLD1P80108 840 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 CDH17Q12864 832 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 SEMA5AQ13591 1074 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 ZRANB3Q5FWF4 1079 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 IGF2-ASQ6U949 168 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 TRIM48Q8IWZ4 208 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 REXO1L1PQ8IX06 675 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 STYXQ8WUJ0 223 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 SGF29Q96ES7 293 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 DCUN1D1Q96GG9 259 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 CMKLR1Q99788 373 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 KCNF1Q9H3M0 494 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 LOXL2Q9Y4K0 774 aa17.1■□□□□ 0.33
DDR1-277ENST00000515219 DNMT3AQ9Y6K1 912 aaPredicted RBP17.1■□□□□ 0.33
DDR1-277ENST00000515219 ACACAQ13085 2346 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 AGAP14A8MT82 685 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 DUX1O43812 170 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 APRTP07741 180 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 RALBP11234 206 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 XRCC1P18887 633 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 MPSTP25325 297 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 CSF2RBP32927 897 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 DRG2P55039 364 aaKnown RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 UBE2IP63279 158 aaKnown RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 CFHR1Q03591 330 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 GPR33Q49SQ1 333 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 ABRAXAS1Q6UWZ7 409 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 WASH2PQ6VEQ5 465 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 ZNF574Q6ZN55 896 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 NXPE1Q8N323 547 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 BEND7Q8N7W2 519 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 NAT14Q8WUY8 206 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 TMEM159Q96B96 161 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 CDKN2AIPNLQ96HQ2 116 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 ZNF514Q96K75 400 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 CCDC74BQ96LY2 380 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 WASH6PQ9NQA3 447 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 HOMER3Q9NSC5 361 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 AKAP7Q9P0M2 348 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 ZNF624Q9P2J8 865 aaPredicted RBP17.09■□□□□ 0.33
DDR1-277ENST00000515219 PISDQ9UG56 409 aa17.09■□□□□ 0.33
DDR1-277ENST00000515219 APC2O95996 2303 aa17.08■□□□□ 0.33
DDR1-277ENST00000515219 IGHV5-10-1A0A0J9YXX1 117 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 OR52A4PA6NMU1 304 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 CDRT15L2A8MXV6 281 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 CFAP99D6REC4 459 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 H7C0S8 307 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 SUN1O94901 812 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 ITGA2BP08514 1039 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 BRAFP15056 766 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 SLC19A1P41440 591 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 GRIA1P42261 906 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 HALP42357 657 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.32
DDR1-277ENST00000515219 ABCG1P45844 678 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 CDKN1CP49918 316 aaPredicted RBP17.08■□□□□ 0.32
DDR1-277ENST00000515219 LIMK2P53671 638 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 DMPKQ09013 629 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 SQSTM1Q13501 440 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 NFE2L1Q14494 772 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 C16orf72Q14CZ0 275 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 COL28A1Q2UY09 1125 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 CCDC38Q502W7 563 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.32
DDR1-277ENST00000515219 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms