RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CARD8Q9Y2G2 431 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 AP1M2Q9Y6Q5 423 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 USP42Q9H9J4 1324 aaKnown RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 AGPSO00116 658 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 BUD23O43709 281 aaKnown RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 AP2A1O95782 977 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SERPINE1P05121 402 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CD2P06729 351 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 PVALBP20472 110 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 PTPN6P29350 595 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 ARL16Q0P5N6 197 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CCDC153Q494R4 210 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 RNASE12Q5GAN4 147 aaKnown RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 TMPRSS11AQ6ZMR5 421 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CELF5Q8N6W0 485 aaKnown RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 SPATA4Q8NEY3 305 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SLC5A5Q92911 643 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 PCDH18Q9HCL0 1135 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SLC24A2Q9UI40 661 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 A0A087WUU8 490 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 A0A1W2PPW3 197 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 IRGMA1A4Y4 181 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 RGSL1A5PLK6 1076 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 MAP2K7O14733 419 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 KLF8O95600 359 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 ALOX12P18054 663 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 LPOP22079 712 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 OXTRP30559 389 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 NEK3P51956 506 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 PYDC2Q56P42 97 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 VWA2Q5GFL6 755 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CATSPER2Q96P56 530 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CLUHO75153 1309 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 RGS12O14924 1447 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 LOC102723532A0A0G2JNH3 316 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GLYATL1P3A0A0U1RQE8 302 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GPR89AB7ZAQ6 455 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GPR89BP0CG08 455 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 ETS1P14921 441 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SDHBP21912 280 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 COMTP21964 271 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 ARPC4P59998 168 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CNKSR3Q6P9H4 555 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 ERN2Q76MJ5 926 aaKnown RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 SAMD14Q8IZD0 417 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 STAG3L4Q8TBR4 150 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 XAGE5Q8WWM1 108 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 RNF145Q96MT1 663 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 BPIFA3Q9BQP9 254 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 OR10A4Q9H209 315 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 MAU2Q9Y6X3 613 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 TSPOAP1O95153 1857 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 CDK2AP1O14519 115 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 TSPAN4O14817 238 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 MT-CYBP00156 380 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 CLEC3BP05452 202 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 PFKMP08237 780 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GLP1RP43220 463 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 GALCP54803 685 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 PRR5P85299 388 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 FSTL1Q12841 308 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
VCAN-208ENST00000512590 FAM83AQ86UY5 434 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 LRRC6Q86X45 466 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 TMEM192Q8IY95 271 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 ARL14Q8N4G2 192 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 NLGN4YQ8NFZ3 816 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 OR5T2Q8NGG2 359 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 NUS1Q96E22 293 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 FAM83DQ9H4H8 585 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 NANOGQ9H9S0 305 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 RAB9BQ9NP90 201 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 MKKSQ9NPJ1 570 aaPredicted RBP8.85□□□□□ -0.99
VCAN-208ENST00000512590 ASB6Q9NWX5 421 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 OGDHLQ9ULD0 1010 aa8.85□□□□□ -0.99
VCAN-208ENST00000512590 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 C1RP00736 705 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CYP4F8P98187 520 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 GSTM4Q03013 218 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PGM5Q15124 567 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ZNF549Q6P9A3 640 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 NECTIN4Q96NY8 510 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 OR1F2PQ96R84 312 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 YIPF3Q9GZM5 350 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SNAP91O60641 907 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CDH16O75309 829 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CYP3A4P08684 503 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 HGFP14210 728 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ITPKAP23677 461 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ADRA1DP25100 572 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 FASP25445 335 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 MC4RP32245 332 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ACLYP53396 1101 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 TLE2Q04725 743 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PRKCZQ05513 592 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms