RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZBTB2Q8N680 514 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 ENDOVQ8N8Q3 282 aaKnown RBP18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 GLIS1Q8NBF1 620 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 TTC13Q8NBP0 860 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 GPR26Q8NDV2 337 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 MARVELD3Q96A59 401 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 ZNF514Q96K75 400 aaPredicted RBP18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 MLPHQ9BV36 600 aaPredicted RBP18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 UNKQ9C0B0 810 aaKnown RBP18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 CNTRLQ7Z7A1 2325 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 SSU72P8A0A1W2PR75 194 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 ARHGAP10A1A4S6 786 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 ANKUB1A6NFN9 424 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 RNF8O76064 485 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 DESP17661 470 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 GPR19Q15760 415 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 ALS2CLQ60I27 953 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 C11orf96Q7Z7L8 435 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 NSMCE1Q8WV22 266 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 MAML1Q92585 1016 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 HSPH1Q92598 858 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 POLR1EQ9GZS1 481 aaKnown RBP18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 PCDH9Q9HC56 1237 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 TRIM39Q9HCM9 518 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 WASH6PQ9NQA3 447 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 TMPRSS11EQ9UL52 423 aa18.63■□□□□ 0.57
HMGCS1-206ENST00000511774 DDX3YO15523 660 aaKnown RBP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 CPNE3O75131 537 aaKnown RBP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 MTA2O94776 668 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 SLC25A14O95258 325 aaPredicted RBP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 ARL4AP40617 200 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 PLEKHS1Q5SXH7 462 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 UBXN4Q92575 508 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 ZNF501Q96CX3 271 aaPredicted RBP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 PPM1MQ96MI6 270 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 BARD1Q99728 777 aaKnown RBP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 TIMM29Q9BSF4 260 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 SPATA16Q9BXB7 569 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 PCDH18Q9HCL0 1135 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 GPR83Q9NYM4 423 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 PKD2L2Q9NZM6 624 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 TCFL5Q9UL49 500 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 DNPEPQ9ULA0 475 aa18.62■□□□□ 0.57
HMGCS1-206ENST00000511774 KMOO15229 486 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 MFSD11O43934 449 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 SCRG1O75711 98 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 JCHAINP01591 159 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 HLA-DQB2P05538 268 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 MMP2P08253 660 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 RARAP10276 462 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 VARSP26640 1264 aaKnown RBP18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 ACY1Q03154 408 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 MMRN1Q13201 1228 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 ATP1A4Q13733 1029 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 ZNF569Q5MCW4 686 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 AGAP9Q5VTM2 703 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 FBXO38Q6PIJ6 1188 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 FAM198BQ6UWH4 519 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 WASH2PQ6VEQ5 465 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 IRF2BP2Q7Z5L9 587 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 LRRTM4Q86VH4 590 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 IQCKQ8N0W5 287 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 D2HGDHQ8N465 521 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 ZNF653Q96CK0 615 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 CXorf40BQ96DE9 158 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 SNX7Q9UNH6 387 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 TTLL3Q9Y4R7 772 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 PKDREJQ9NTG1 2253 aa18.61■□□□□ 0.57
HMGCS1-206ENST00000511774 MED13LQ71F56 2210 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 F5H423 210 aaPredicted RBP18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 FECHP22830 423 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 CA5AP35218 305 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 VAV2P52735 878 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 CDK18Q07002 472 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 ABRQ12979 859 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 ANKRD20A8PQ5CZ79 823 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 HPS6Q86YV9 775 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 TMEM126BQ8IUX1 230 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 SLC34A3Q8N130 599 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 NEK11Q8NG66 645 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 GLYATL1Q969I3 302 aa18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 RBM22Q9NW64 420 aaKnown RBP eCLIP18.6■□□□□ 0.57
HMGCS1-206ENST00000511774 RGSL1A5PLK6 1076 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 HNRNPRO43390 633 aaKnown RBP18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 LCA5LO95447 670 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 CD48P09326 243 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 RAB40ALP0C0E4 278 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 PIRTP0C851 137 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 RORAP35398 523 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 PCK1P35558 622 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 RPL26P61254 145 aaKnown RBP18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 TUBB4BP68371 445 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 PDE1BQ01064 536 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 TUBB2AQ13885 445 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 FKBP15Q5T1M5 1219 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 CYB5D1Q6P9G0 228 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 BPHLQ86WA6 291 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms