RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LRRC3Q9BY71 257 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 NANOGQ9H9S0 305 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 POLE4Q9NR33 117 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 INTS10Q9NVR2 710 aaKnown RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 FKBPLQ9UIM3 349 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 PSME2Q9UL46 239 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 SAMHD1Q9Y3Z3 626 aaKnown RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 KIAA0100Q14667 2235 aaKnown RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 BTBD19C9JJ37 291 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 XPNPEP2O43895 674 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 PRKD3O94806 890 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 C1RP00736 705 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 HAPLN1P10915 354 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 SLC6A2P23975 617 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 PPP3CCP48454 512 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 LINGO4Q6UY18 593 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 NECAB2Q7Z6G3 386 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 SLC15A4Q8N697 577 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 ZFYVE19Q96K21 471 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 FBXO44Q9H4M3 255 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 IPPKQ9H8X2 491 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 EVLQ9UI08 416 aaPredicted RBP14.74□□□□□ -0.05
USP38-202ENST00000510377 PCDHB9Q9Y5E1 797 aa14.74□□□□□ -0.05
USP38-202ENST00000510377 H0Y858 1186 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 hCG_2039718K7EN88 272 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ASNA1O43681 348 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 NDUFS2O75306 463 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 DIRAS1O95057 198 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 UROSP10746 265 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 PWP1Q13610 501 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ZNF549Q6P9A3 640 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 AFTPHQ6ULP2 937 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 FAM151BQ6UXP7 276 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 AHSA2Q719I0 299 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 RASAL3Q86YV0 1011 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ARL10Q8N8L6 244 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 SMG8Q8ND04 991 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 FAM32AQ9Y421 112 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 KRT6AP02538 564 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 KRT6BP04259 564 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 UMPSP11172 480 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 KRT6CP48668 564 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ARSFP54793 590 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CREB5Q02930 508 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 PIWIL3Q7Z3Z3 882 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 PTERQ96BW5 349 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 REXO5Q96IC2 774 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 CAPNS2Q96L46 248 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 GSTO2Q9H4Y5 243 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ZNF556Q9HAH1 456 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TMA7Q9Y2S6 64 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 PCDHB5Q9Y5E4 795 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TRPV2Q9Y5S1 764 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 USP3Q9Y6I4 520 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ELOVL7A1L3X0 281 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 MAFKO60675 156 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 BMP2P12643 396 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 AFF1P51825 1210 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 TRIM32Q13049 653 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CRY1Q16526 586 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CYP2A13Q16696 494 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 SYT16Q17RD7 645 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 RNF180Q86T96 592 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ISCA2Q86U28 154 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CARM1Q86X55 608 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 SNX29P2Q8IUI4 249 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TLR8Q9NR97 1041 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 FAIMQ9NVQ4 179 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 PTBP2Q9UKA9 531 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 WDR47O94967 919 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ALDOCP09972 364 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 G6PDP11413 515 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 MYCLP1P12525 358 aaPredicted RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 LPOP22079 712 aaPredicted RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 IGFBP5P24593 272 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 RFC2P35250 354 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 BCAP31P51572 246 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 BOP1Q14137 746 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 OR4D1Q15615 310 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 MOGQ16653 247 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ALFQ53S48 1182 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TMC5Q6UXY8 1006 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TMEM132CQ8N3T6 1108 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 LEMD2Q8NC56 503 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 ZUFSPQ96AP4 578 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 C1QTNF1Q9BXJ1 281 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CEP44Q9C0F1 390 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 TNFRSF12AQ9NP84 129 aa14.73□□□□□ -0.05
USP38-202ENST00000510377 CNOT11Q9UKZ1 510 aaKnown RBP14.73□□□□□ -0.05
USP38-202ENST00000510377 RAP2AP10114 183 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ACADVLP49748 655 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 BMXP51813 675 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 MRPS6P82932 125 aaKnown RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 EPS8Q12929 822 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 PAGE3Q5JUK9 113 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 NOL9Q5SY16 702 aaKnown RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 NANOGNBQ7Z5D8 188 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms