RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	IRGC	Q6NXR0	463 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	RPUSD3	Q6P087	351 aa	Known RBP	9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	SHC4	Q6S5L8	630 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	SLC26A9	Q7LBE3	791 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	HSD11B1L	Q7Z5J1	315 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	PHLDB2	Q86SQ0	1253 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	PPM1K	Q8N3J5	372 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	WDTC1	Q8N5D0	677 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	C18orf12	Q96KH6	178 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	IP6K3	Q96PC2	410 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	GBP5	Q96PP8	586 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	TUBGCP5	Q96RT8	1024 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	TRIM56	Q9BRZ2	755 aa	Known RBP	9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	LIME1	Q9H400	295 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	TMEM248	Q9NWD8	314 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZDHHC3	Q9NYG2	299 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	EPHA6	Q9UF33	1036 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	NEU3	Q9UQ49	428 aa		9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	CHD3	Q12873	2000 aa	Known RBP	9.37	□□□□□ -0.91
PTPN20-223	ENST00000509900	OR5K4	A6NMS3	321 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	DNAJC6	O75061	913 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	KLF7	O75840	302 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	LETM1	O95202	739 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ERBB2	P04626	1255 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	SLC2A4	P14672	509 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	TNFAIP3	P21580	790 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ADSL	P30566	484 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	YBX1	P67809	324 aa	Known RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	GPR19	Q15760	415 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	C3AR1	Q16581	482 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZCWPW2	Q504Y3	356 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	DCAF17	Q5H9S7	520 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	TCERG1L	Q5VWI1	586 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	DENND2C	Q68D51	928 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	C11orf57	Q6ZUT1	292 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900		Q6ZVL8	140 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	CHST15	Q7LFX5	561 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	PHC2	Q8IXK0	858 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900		Q8N3U1	123 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	AVL9	Q8NBF6	648 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	CATSPER1	Q8NEC5	780 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZNF397	Q8NF99	534 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZNF606	Q8WXB4	792 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	UBXN4	Q92575	508 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZDHHC12	Q96GR4	267 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	NT5C1B	Q96P26	610 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ACP6	Q9NPH0	428 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	P4HTM	Q9NXG6	502 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	SCHIP1	Q9P0W5	487 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZNF624	Q9P2J8	865 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	TINAG	Q9UJW2	476 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	MAPK8IP1	Q9UQF2	711 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	CPAMD8	Q8IZJ3	1885 aa		9.36	□□□□□ -0.91
PTPN20-223	ENST00000509900	SON	P18583	2426 aa	Known RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM72C	H0Y354	149 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	CDK2AP1	O14519	115 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	HEXIM1	O94992	359 aa	Known RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM157B	P0CG42	384 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ESRRA	P11474	423 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ACP5	P13686	325 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	XRCC1	P18887	633 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	MST1	P26927	711 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	SERPINA4	P29622	427 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	GPR1	P46091	355 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	TUBB4B	P68371	445 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	SLC6A3	Q01959	620 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	TUBB2A	Q13885	445 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	PTCHD3	Q3KNS1	767 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM72A	Q5TYM5	149 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM72D	Q6L9T8	149 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	RWDD4	Q6NW29	188 aa	Known RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ADAMTSL4	Q6UY14	1074 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	RFLNA	Q6ZTI6	216 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	RRAGA	Q7L523	313 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM72B	Q86X60	149 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FAM131B	Q86XD5	332 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZNF354C	Q86Y25	554 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	SYTL1	Q8IYJ3	562 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	WFDC11	Q8NEX6	87 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ZNF501	Q96CX3	271 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	TMX3	Q96JJ7	454 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	MAGEB10	Q96LZ2	347 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	NSMCE3	Q96MG7	304 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ALPK1	Q96QP1	1244 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	TUBB2B	Q9BVA1	445 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	MAGEB5	Q9BZ81	275 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	RAB33B	Q9H082	229 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ATP13A3	Q9H7F0	1226 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	METTL14	Q9HCE5	456 aa	Known RBP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	KCND1	Q9NSA2	647 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	PCMTD2	Q9NV79	361 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	KCTD5	Q9NXV2	234 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	ST6GALNAC2	Q9UJ37	374 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	STAP1	Q9ULZ2	295 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	CNTN6	Q9UQ52	1028 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	SMC3	Q9UQE7	1217 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	CUBN	O60494	3623 aa		9.35	□□□□□ -0.91
PTPN20-223	ENST00000509900	PEX12	O00623	359 aa		9.34	□□□□□ -0.91

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