RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DAAM2Q86T65 1068 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 PHYKPLQ8IUZ5 450 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 CCDC170Q8IYT3 715 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 RCOR2Q8IZ40 523 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 NLGN4XQ8N0W4 816 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 LRRC57Q8N9N7 239 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 NLGN4YQ8NFZ3 816 aaPredicted RBP10.74□□□□□ -0.69
RNF4-212ENST00000509258 ACTL9Q8TC94 416 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 P3H4Q92791 437 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 SLC45A3Q96JT2 553 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 PANX2Q96RD6 677 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 FCRL5Q96RD9 977 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 APOL2Q9BQE5 337 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 ZSCAN5AQ9BUG6 496 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 TRIT1Q9H3H1 467 aaKnown RBP10.74□□□□□ -0.69
RNF4-212ENST00000509258 GPN2Q9H9Y4 310 aaPredicted RBP10.74□□□□□ -0.69
RNF4-212ENST00000509258 UGT1A7Q9HAW7 530 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 UGT1A10Q9HAW8 530 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 UGT1A8Q9HAW9 530 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 SARS2Q9NP81 518 aaKnown RBP10.74□□□□□ -0.69
RNF4-212ENST00000509258 IL26Q9NPH9 171 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 RAD18Q9NS91 495 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 IL17CQ9P0M4 197 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 KLHL8Q9P2G9 620 aaPredicted RBP10.74□□□□□ -0.69
RNF4-212ENST00000509258 PDP2Q9P2J9 529 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 FAM153AQ9UHL3 310 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 PILRAQ9UKJ1 303 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 DNAJC16Q9Y2G8 782 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 KCTD3Q9Y597 815 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 SLC30A1Q9Y6M5 507 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 CCDC88CQ9P219 2028 aa10.74□□□□□ -0.69
RNF4-212ENST00000509258 NBASA2RRP1 2371 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 GPR89AB7ZAQ6 455 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 PJA2O43164 708 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 GPR89BP0CG08 455 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 PYGMP11217 842 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 MAP4P27816 1152 aaKnown RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 ADRA1AP35348 466 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 SLC19A1P41440 591 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 MAPK9P45984 424 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 CTSCP53634 463 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 GFERP55789 205 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 OTUD4Q01804 1114 aaKnown RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 SLC1A5Q15758 541 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 SEPT7Q16181 437 aaKnown RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 ODF2Q5BJF6 829 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 SNAP47Q5SQN1 464 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 CYB5D1Q6P9G0 228 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 FAM151BQ6UXP7 276 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 FAM83HQ6ZRV2 1179 aaPredicted RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 PID1Q7Z2X4 250 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 ARHGAP22Q7Z5H3 698 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 RASGEF1AQ8N9B8 481 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 RTP4Q96DX8 246 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 CTRCQ99895 268 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 DESI2Q9BSY9 194 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 FICDQ9BVA6 458 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 EPN3Q9H201 632 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 OSGEPL1Q9H4B0 414 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 APMAPQ9HDC9 416 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 CPNE7Q9UBL6 633 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 ANAPC2Q9UJX6 822 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
RNF4-212ENST00000509258 WDR37Q9Y2I8 494 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 PCDHA3Q9Y5H8 950 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 ARL5AQ9Y689 179 aa10.73□□□□□ -0.69
RNF4-212ENST00000509258 MED13Q9UHV7 2174 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 DOPEY2Q9Y3R5 2298 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 TCRBV7S2A1N4TA0A589 114 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 OR52A4PA6NMU1 304 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 H7C0C1 242 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 APOC4-APOC2K7ER74 178 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 APOC2P02655 101 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 ZNF7P17097 686 aaPredicted RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 CTNNA2P26232 953 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 RPL10P27635 214 aaKnown RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 PSMB4P28070 264 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 CYLC1P35663 651 aaPredicted RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 HMGCLP35914 325 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 CASRP41180 1078 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 ATP5OP48047 213 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 CLCNKAP51800 687 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 DRG2P55039 364 aaKnown RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 PPP1CAP62136 330 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.694e-6■□□□□ 8.1
RNF4-212ENST00000509258 CDC20Q12834 499 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 COLEC12Q5KU26 742 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 PDPK2PQ6A1A2 396 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 CCDC70Q6NSX1 233 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 PTRH1Q86Y79 214 aaKnown RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 TRIM48Q8IWZ4 208 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 GPR150Q8NGU9 434 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 C9orf43Q8TAL5 461 aaPredicted RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 CCDC110Q8TBZ0 833 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms