RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 IRGCQ6NXR0 463 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 RPUSD3Q6P087 351 aaKnown RBP9.37□□□□□ -0.91
PTPN20-219ENST00000508602 SHC4Q6S5L8 630 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 HSD11B1LQ7Z5J1 315 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 PHLDB2Q86SQ0 1253 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 IP6K3Q96PC2 410 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
PTPN20-219ENST00000508602 LIME1Q9H400 295 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 TMEM248Q9NWD8 314 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
PTPN20-219ENST00000508602 CHD3Q12873 2000 aaKnown RBP9.37□□□□□ -0.91
PTPN20-219ENST00000508602 OR5K4A6NMS3 321 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 DNAJC6O75061 913 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 KLF7O75840 302 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 LETM1O95202 739 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ERBB2P04626 1255 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 SLC2A4P14672 509 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 YBX1P67809 324 aaKnown RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 GPR19Q15760 415 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 C3AR1Q16581 482 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ZCWPW2Q504Y3 356 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 TCERG1LQ5VWI1 586 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 C11orf57Q6ZUT1 292 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 Q6ZVL8 140 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 NCCRP1Q6ZVX7 275 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 CHST15Q7LFX5 561 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 PHC2Q8IXK0 858 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 Q8N3U1 123 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 AVL9Q8NBF6 648 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 CATSPER1Q8NEC5 780 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ZNF606Q8WXB4 792 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 UBXN4Q92575 508 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ZDHHC12Q96GR4 267 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 NT5C1BQ96P26 610 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ACP6Q9NPH0 428 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 P4HTMQ9NXG6 502 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 SCHIP1Q9P0W5 487 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 ZNF624Q9P2J8 865 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-219ENST00000508602 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
PTPN20-219ENST00000508602 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM72CH0Y354 149 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 HEXIM1O94992 359 aaKnown RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ESRRAP11474 423 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ACP5P13686 325 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 XRCC1P18887 633 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 MST1P26927 711 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 SERPINA4P29622 427 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 GPR1P46091 355 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 TUBB4BP68371 445 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 SLC6A3Q01959 620 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 TUBB2AQ13885 445 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 PTCHD3Q3KNS1 767 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM72AQ5TYM5 149 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM72DQ6L9T8 149 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ADAMTSL4Q6UY14 1074 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 RFLNAQ6ZTI6 216 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 RRAGAQ7L523 313 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM72BQ86X60 149 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ZNF354CQ86Y25 554 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 SYTL1Q8IYJ3 562 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ZNF501Q96CX3 271 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 MAGEB10Q96LZ2 347 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 NSMCE3Q96MG7 304 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 TUBB2BQ9BVA1 445 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 RAB33BQ9H082 229 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ATP13A3Q9H7F0 1226 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 METTL14Q9HCE5 456 aaKnown RBP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 KCTD5Q9NXV2 234 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPN20-219ENST00000508602 ST6GALNAC2Q9UJ37 374 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 CUBNO60494 3623 aa9.35□□□□□ -0.91
PTPN20-219ENST00000508602 PEX12O00623 359 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms