RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ZNF547Q8IVP9 402 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 BEND7Q8N7W2 519 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 DDHD1Q8NEL9 900 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 OR10G6Q8NH81 332 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 NCSTNQ92542 709 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 CXorf40BQ96DE9 158 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 SGF29Q96ES7 293 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 DCUN1D1Q96GG9 259 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 LIN37Q96GY3 246 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 CRELD1Q96HD1 420 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 PRR11Q96HE9 360 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 CCDC74BQ96LY2 380 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 SLC46A1Q96NT5 459 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 TIMM29Q9BSF4 260 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 TBC1D10AQ9BXI6 508 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 TLR10Q9BXR5 811 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 FRMD8P1Q9BZ68 369 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 TRMT1Q9NXH9 659 aaKnown RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 AKAP7Q9P0M2 348 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 TMEM9Q9P0T7 183 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 CPNE7Q9UBL6 633 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 FEZ2Q9UHY8 353 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 PSMD13Q9UNM6 376 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 DSPP15924 2871 aaKnown RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 CELSR3Q9NYQ7 3312 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 KIR2DS5A0A0G2JLQ3 304 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 PRAMEF33A0A0G2JMD5 474 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 A0A0G2JNG1 304 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 OR5K4A6NMS3 321 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 OR52A4PA6NMU1 304 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 KIR2DS3K7RE56 304 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 KLK10O43240 276 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 LDB2O43679 373 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 DUX1O43812 170 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 APRTP07741 180 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 PRSS56P0CW18 603 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 RALBP11234 206 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 TYRP1P17643 537 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 AMD1P17707 334 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 CCKBRP32239 447 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 CSF2RBP32927 897 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 HADHAP40939 763 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 HALP42357 657 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 FASLGP48023 281 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 CDKN1CP49918 316 aaPredicted RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 ZNF140P52738 457 aaPredicted RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 BASP1P80723 227 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 ZFP36L1Q07352 338 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 NFE2L1Q14494 772 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 KIR2DS5Q14953 304 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 C16orf72Q14CZ0 275 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 ZNF574Q6ZN55 896 aaPredicted RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 LINC00523Q86TU6 105 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 AMZ2Q86W34 360 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 SLITRK4Q8IW52 837 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 GLIS1Q8NBF1 620 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 ZNF248Q8NDW4 579 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 SNIP1Q8TAD8 396 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 UBE2Q2Q8WVN8 375 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 MAIP1Q8WWC4 291 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 KCNE4Q8WWG9 221 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 SH3KBP1Q96B97 665 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 CMKLR1Q99788 373 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 SARS2Q9NP81 518 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 PAK5Q9P286 719 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 PCDHGA8Q9Y5G5 932 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 CFAP20Q9Y6A4 193 aaKnown RBP9.23□□□□□ -0.93
DDX41-209ENST00000508279 CFAP47Q6ZTR5 3102 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 PKD1L2Q7Z442 2459 aa9.23□□□□□ -0.93
DDX41-209ENST00000508279 A0A087WV48 116 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 IGHV5-10-1A0A0J9YXX1 117 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 A6NCN8 305 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 OR51F1A6NGY5 319 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CFAP99D6REC4 459 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
DDX41-209ENST00000508279 POLBP06746 335 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 ITGA2BP08514 1039 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CCL4P13236 92 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 SLC5A2P31639 672 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CSTF2P33240 577 aaKnown RBP eCLIP9.22□□□□□ -0.93
DDX41-209ENST00000508279 RPL22P35268 128 aaKnown RBP9.22□□□□□ -0.93
DDX41-209ENST00000508279 ETV5P41161 510 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 SLC19A1P41440 591 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 GRIA1P42261 906 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 VPS41P49754 854 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CLCNKAP51800 687 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 LIMK2P53671 638 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 ERVPABLB-1P60509 514 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 GPLD1P80108 840 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 XIAPP98170 497 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CFHR1Q03591 330 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 CDH17Q12864 832 aa9.22□□□□□ -0.93
DDX41-209ENST00000508279 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
DDX41-209ENST00000508279 MSLNQ13421 630 aaPredicted RBP9.22□□□□□ -0.93
DDX41-209ENST00000508279 NR1D2Q14995 579 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms