RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	KHDC1	Q4VXA5	237 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZRANB3	Q5FWF4	1079 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	FNBP1L	Q5T0N5	605 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	GPRC6A	Q5T6X5	926 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	IYD	Q6PHW0	289 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	CCDC137	Q6PK04	289 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	TMEM220	Q6QAJ8	160 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	NLRP9	Q7RTR0	991 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZNF438	Q7Z4V0	828 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SPRED1	Q7Z699	444 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	PRUNE1	Q86TP1	453 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SLC9B2	Q86UD5	537 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	AMZ2	Q86W34	360 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZNF547	Q8IVP9	402 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SFTPA2	Q8IWL1	248 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	TRIM48	Q8IWZ4	208 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	NXPE1	Q8N323	547 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SFRP1	Q8N474	314 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	RASGEF1A	Q8N9B8	481 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692		Q8N9G6	341 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	KDF1	Q8NAX2	398 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	GLIS1	Q8NBF1	620 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	PPHLN1	Q8NEY8	458 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	MDM1	Q8TC05	714 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ACTRT1	Q8TDG2	376 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SLC37A2	Q8TED4	501 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	COG1	Q8WTW3	980 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	HEXDC	Q8WVB3	486 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	PATE1	Q8WXA2	126 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	PEX13	Q92968	403 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	MAGOHB	Q96A72	148 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SH3KBP1	Q96B97	665 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	DCUN1D1	Q96GG9	259 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	CDKN2AIPNL	Q96HQ2	116 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZNF514	Q96K75	400 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	DNAJC1	Q96KC8	554 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	TMEM74	Q96NL1	305 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	RANBP9	Q96S59	729 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	NAPG	Q99747	312 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	AP1M1	Q9BXS5	423 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	STRADB	Q9C0K7	418 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	OCEL1	Q9H607	264 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	SARS2	Q9NP81	518 aa	Known RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	CASS4	Q9NQ75	786 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	DKK4	Q9UBT3	224 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	TBC1D29	Q9UFV1	150 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	RABGEF1	Q9UJ41	708 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	PYCARD	Q9ULZ3	195 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	DNAJC16	Q9Y2G8	782 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ENTPD2	Q9Y5L3	495 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	AK5	Q9Y6K8	562 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ATRX	P46100	2492 aa		4.95	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZGRF1	Q86YA3	2104 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	KALRN	O60229	2985 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	TRBV23OR9-2	A0A075B6M9	112 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CCDC187	A0A096LP49	1063 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	TRBV5-4	A0A0C4DH59	114 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692		A0A1W2PQM1	296 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CCDC78	A2IDD5	438 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CTAGE9	A4FU28	777 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692		A6NCN8	305 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	OR2AG2	A6NM03	316 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PDZK1P1	A8MUH7	402 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CCL22	O00626	93 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	ZNF185	O15231	689 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PPM1D	O15297	605 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	DUX1	O43812	170 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	BRINP1	O60477	761 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CPNE6	O95741	557 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	EML2	O95834	649 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	VIP	P01282	170 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	ATP1B2	P14415	290 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	XRCC1	P18887	633 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PSMA3	P25788	255 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	ACRV1	P26436	265 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	RPL10	P27635	214 aa	Known RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PBLD	P30039	288 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CA5A	P35218	305 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PPARG	P37231	505 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	GRIA1	P42261	906 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	HAL	P42357	657 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	NPY2R	P49146	381 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	FNTA	P49354	379 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	VPS41	P49754	854 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CDKN1C	P49918	316 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CTSC	P53634	463 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	EPHA4	P54764	986 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	INHBC	P55103	352 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	SESN2	P58004	480 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	OR1D5	P58170	312 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	GABRE	P78334	506 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	PRAME	P78395	509 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	GPLD1	P80108	840 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	B4GALNT1	Q00973	533 aa		4.94	□□□□□ -1.62
SNHG4-205	ENST00000507692	CYP4F3	Q08477	520 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms