RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 C4orf47A7E2U8 309 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 SCAMP1O15126 338 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 AQP9O43315 295 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 SDC3O75056 442 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 AP2A2O94973 939 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 S1PR4O95977 384 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 C1QAP02745 245 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CELA2BP08218 269 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 MYBL2P10244 700 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 ERVK-10P10266 1014 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CD59P13987 128 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CTSEP14091 401 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 RPS3P23396 243 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 PRLHRP49683 370 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CLCNKAP51800 687 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 ADARP55265 1226 aaKnown RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CTBSQ01459 385 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 C1orf61Q13536 156 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 THOC5Q13769 683 aaKnown RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 LRP8Q14114 963 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 ELOCQ15369 112 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 TEDDM1Q5T9Z0 273 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 STPG1Q5TH74 334 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF449Q6P9G9 518 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 GATAD2AQ86YP4 633 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 DENND6AQ8IWF6 608 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 C2CD4AQ8NCU7 369 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 CCL4L1Q8NHW4 92 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 LMX1AQ8TE12 382 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 NAT14Q8WUY8 206 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 UBXN4Q92575 508 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 LPGAT1Q92604 370 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 TIMM29Q9BSF4 260 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 FAM167BQ9BTA0 163 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 IARS2Q9NSE4 1012 aaKnown RBP12.66□□□□□ -0.38
TCOF1-210ENST00000506767 SLC23A2Q9UGH3 650 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 PLEKHM1Q9Y4G2 1056 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 GVINP1Q7Z2Y8 2422 aa12.66□□□□□ -0.38
TCOF1-210ENST00000506767 NEMP2A6NFY4 417 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 TPP1O14773 563 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 KCNJ13O60928 360 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF7P17097 686 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 PMLP29590 882 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 SLC1A2P43004 574 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 MGAT5Q09328 741 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 CTBP1Q13363 440 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 KYNUQ16719 465 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 ERCC6LQ2NKX8 1250 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF658BQ4V348 819 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF789Q5FWF6 425 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 RNF187Q5TA31 235 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF470Q6ECI4 717 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 LVRNQ6Q4G3 990 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 CRTC3Q6UUV7 619 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 DET1Q7L5Y6 550 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 GALNT7Q86SF2 657 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 LRRC6Q86X45 466 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 TRAPPC5Q8IUR0 188 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 CLDN19Q8N6F1 224 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 BIRC8Q96P09 236 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 FUT8Q9BYC5 575 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 GSDMCQ9BYG8 508 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 TXLNGYQ9BZA5 131 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 INTS10Q9NVR2 710 aaKnown RBP12.65□□□□□ -0.38
TCOF1-210ENST00000506767 NINJ2Q9NZG7 142 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 GULP1Q9UBP9 304 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 FBXO5Q9UKT4 447 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 FRYLO94915 3013 aa12.65□□□□□ -0.38
TCOF1-210ENST00000506767 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 ZFC3H1O60293 1989 aaKnown RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 C17orf113A0A1B0GUU1 675 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 TCRBV9S1A1TA0A576 114 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 QSOX1O00391 747 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 PRMT5O14744 637 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 PFDN6O15212 129 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 YY2O15391 372 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 NDUFS3O75489 264 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 SPAG6O75602 509 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 POP7O75817 140 aaKnown RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 ACP5P13686 325 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 GABRB3P28472 473 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 ARHGAP8P85298 464 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 DMPKQ09013 629 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 ILF3Q12906 894 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms