RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RNF165Q6ZSG1 346 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 Q6ZSR9 355 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 OR2T11Q8NH01 316 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 CHPT1Q8WUD6 406 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 PDLIM5Q96HC4 596 aaKnown RBP14.82□□□□□ -0.04
SNF8-203ENST00000504000 TMEM74Q96NL1 305 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 MUS81Q96NY9 551 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 UGT2B28Q9BY64 529 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 INTS7Q9NVH2 962 aaKnown RBP14.82□□□□□ -0.04
SNF8-203ENST00000504000 COMMD8Q9NX08 183 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 USE1Q9NZ43 259 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 SEPT3Q9UH03 358 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 PSME2Q9UL46 239 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 PADI3Q9ULW8 664 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 FAM50BQ9Y247 325 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 AP3M1Q9Y2T2 418 aa14.82□□□□□ -0.04
SNF8-203ENST00000504000 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 TMEM189-UBE2V1I3L0A0 370 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 SYNCRIPO60506 623 aaKnown RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 PKMP14618 531 aaKnown RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 PORP16435 677 aaPredicted RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 JAK1P23458 1154 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 OR1E1P30953 314 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 FMO4P31512 558 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 ETFBP38117 255 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 TTPAP49638 278 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 OR4D2P58180 307 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 FKBP1BP68106 108 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 PHEXP78562 749 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 PWP1Q13610 501 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 GALNT3Q14435 633 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 RAP1GAP2Q684P5 730 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 GTF2IRD2BQ6EKJ0 949 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 XAF1Q6GPH4 301 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 GTF2IRD2Q86UP8 949 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 PJA1Q8NG27 643 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 KCNJ9Q92806 393 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 TANKQ92844 425 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 RPRD1AQ96P16 312 aaPredicted RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 PSKH2Q96QS6 385 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 SEPHS2Q99611 448 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 CGREF1Q99674 301 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 GPR21Q99679 349 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 FEM1AQ9BSK4 669 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNF8-203ENST00000504000 TNPO3Q9Y5L0 923 aaKnown RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 MRPL42Q9Y6G3 142 aaKnown RBP14.81□□□□□ -0.04
SNF8-203ENST00000504000 UTRNP46939 3433 aa14.81□□□□□ -0.04
SNF8-203ENST00000504000 C2orf81A6NN90 581 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 BTN3A1O00481 513 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 ANKRD28O15084 1053 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MGEA5O60502 916 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 DUSP11O75319 330 aaKnown RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 ITGB1P05556 798 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MSH3P20585 1137 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 UGT1A1P22309 533 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 UGT1A4P22310 534 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 CRHBPP24387 322 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MAP4P27816 1152 aaKnown RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 UGT1A3P35503 534 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 UGT1A5P35504 534 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MAGEA8P43361 318 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 KPNA1P52294 538 aaPredicted RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 IL2P60568 153 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 KCNC4Q03721 635 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 CHRNB3Q05901 458 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 EFEMP1Q12805 493 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 PCBP2Q15366 365 aaKnown RBP eCLIP14.8□□□□□ -0.04
SNF8-203ENST00000504000 PYCR3Q53H96 274 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 GDF6Q6KF10 455 aaPredicted RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 DCDC5Q6ZRR9 648 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 TRIM74Q86UV6 250 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 TRIM73Q86UV7 250 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 GPSM1Q86YR5 675 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 SVOPLQ8N434 492 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 DTWD1Q8N5C7 304 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 ITFG1Q8TB96 612 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 HASPINQ8TF76 798 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 PTPN18Q99952 460 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 TRIM8Q9BZR9 551 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MAGEH1Q9H213 219 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 NUDT4Q9NZJ9 180 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 GALPQ9UBC7 116 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 BLOC1S6Q9UL45 172 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 SCN10AQ9Y5Y9 1956 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 GMNNO75496 209 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 CTSHP09668 335 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 MATN1P21941 496 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 POLR2IP36954 125 aaKnown RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 ACVRL1P37023 503 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 BMXP51813 675 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 TOP3AQ13472 1001 aaPredicted RBP14.8□□□□□ -0.04
SNF8-203ENST00000504000 PLCL1Q15111 1095 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 NEDD8Q15843 81 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 RBBP7Q16576 425 aa14.8□□□□□ -0.04
SNF8-203ENST00000504000 PTPRNQ16849 979 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms