RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 MRPL40Q9NQ50 206 aaKnown RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 MED16Q9Y2X0 877 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 PCYT1BQ9Y5K3 369 aaPredicted RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 R4GN57 208 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR89AB7ZAQ6 455 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 TRIM49D1C9J1S8 452 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 H3BMM5 538 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 CHUKO15111 745 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 DNAJC6O75061 913 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR89BP0CG08 455 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 CHRM3P20309 590 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 CDKN2DP55273 166 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 OVGP1Q12889 678 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 PTK2BQ14289 1009 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 USP10Q14694 798 aaKnown RBP20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 KCTD16Q68DU8 428 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 FAM45BPQ6NSW5 357 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 TRAPPC5Q8IUR0 188 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 ZNF547Q8IVP9 402 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 KRT222Q8N1A0 295 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 FAM45AQ8TCE6 357 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 FAM136AQ96C01 138 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 ZNF514Q96K75 400 aaPredicted RBP20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 CENPHQ9H3R5 247 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 FGF22Q9HCT0 170 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 LGALS13Q9UHV8 139 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 MOSPD1Q9UJG1 213 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR34Q9UPC5 381 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 PRKAB1Q9Y478 270 aa20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 ATXN2Q99700 1313 aaKnown RBP20.11■□□□□ 0.81
CDC42SE2-206ENST00000503291 SPTY2D1-AS1A0A0U1RR47 76 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 TLR4O00206 839 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 TRIM16O95361 564 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 CSNK1EP49674 416 aaKnown RBP20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 AFF3P51826 1226 aaKnown RBP20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 PGGT1BP53609 377 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 TAS2R39P59534 338 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 POU4F1Q01851 419 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 DCP2Q8IU60 420 aaKnown RBP20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 KCNJ9Q92806 393 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 MTBPQ96DY7 904 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 OLFM1Q99784 485 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 ZNHIT2Q9UHR6 403 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 PILRBQ9UKJ0 227 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 FOXO6A8MYZ6 492 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 E5RI56 91 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 QSOX1O00391 747 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 MYZAPP0CAP1 466 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 ITGB6P18564 788 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 KRT15P19012 456 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 PRLHRP49683 370 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 TIAL1Q01085 375 aaKnown RBP eCLIP20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 CRTC3Q6UUV7 619 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 LKAAEAR1Q8TD35 194 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 MZB1Q8WU39 189 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 SCARF2Q96GP6 870 aaPredicted RBP20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 RMI1Q9H9A7 625 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 CYP4F12Q9HCS2 524 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 TAS2R13Q9NYV9 303 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 GALPQ9UBC7 116 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 SUFUQ9UMX1 484 aa20.1■□□□□ 0.81
CDC42SE2-206ENST00000503291 PRSS38A1L453 326 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 F8W8V4 182 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 TNFRSF10CO14798 259 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 VILLO15195 856 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 RGS16O15492 202 aaPredicted RBP20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 GRID2O43424 1007 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 ATP8B1O43520 1251 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 ALDOAP04075 364 aaKnown RBP20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 GNSP15586 552 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 SLC12A2P55011 1212 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 FZD2Q14332 565 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 LPAL2Q16609 132 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 BCL7AQ4VC05 210 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 CEP97Q8IW35 865 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 OR1E3Q8WZA6 343 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 PIGKQ92643 395 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 TSACCQ96A04 125 aaPredicted RBP20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 PANX3Q96QZ0 392 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 PNMA8BQ9ULN7 279 aaPredicted RBP20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 KNL1Q8NG31 2342 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 A0A1B0GTW7 788 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 GOLGA6L10A6NI86 522 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 FDXRP22570 491 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 DNAJC3Q13217 504 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 CMC1Q7Z7K0 106 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 LRRTM4Q86VH4 590 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 CNPY4Q8N129 248 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 PDXPQ96GD0 296 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR21Q99679 349 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 SARS2Q9NP81 518 aaKnown RBP20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 KLQ9UEF7 1012 aa20.09■□□□□ 0.81
CDC42SE2-206ENST00000503291 TNRC6BQ9UPQ9 1833 aaKnown RBP20.08■□□□□ 0.81
CDC42SE2-206ENST00000503291 A0A1W2PPM1 405 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 MAGEC1O60732 1142 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 VPS26AO75436 327 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 FTH1P02794 183 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 STMN1P16949 149 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 TYK2P29597 1187 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SRP54P61011 504 aaKnown RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms