RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 CAPZA1P52907 286 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 S100A10P60903 97 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 XKR4Q5GH76 650 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 B3GAT2Q9NPZ5 323 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 H3BRB1 525 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 TGDSO95455 350 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 CASRP41180 1078 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 MLIPQ5VWP3 458 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 NODALQ96S42 347 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF347Q96SE7 839 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
AC055713.1-201ENST00000498967 CCRL2O00421 344 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MT-CO1P00395 513 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CD247P20963 164 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TBC1D10CQ8IV04 446 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF527Q8NB42 609 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ACTL9Q8TC94 416 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ELOVL4Q9GZR5 314 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 HIPK3Q9H422 1215 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 AP1M2Q9Y6Q5 423 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MYH1P12882 1939 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MYH2Q9UKX2 1941 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MYH4Q9Y623 1939 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 UNC5CO95185 931 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PLGP00747 810 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 NKX6-1P78426 367 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MC1RQ01726 317 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 LIPMQ5VYY2 423 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 RNF148Q8N7C7 305 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 KCTD7Q96MP8 289 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ZFP3Q96NJ6 502 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CAMK1GQ96NX5 476 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CEP250Q9BV73 2442 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ITGAVP06756 1048 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CTSHP09668 335 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 DDX6P26196 483 aaKnown RBP eCLIP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 HSD11B1P28845 292 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 LAS2Q8IYD9 372 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CASKIN2Q8WXE0 1202 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TIFAQ96CG3 184 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 THUMPD1Q9NXG2 353 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CA5BQ9Y2D0 317 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ENTPD6O75354 484 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MTHFRP42898 656 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 C2orf80Q0P641 193 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 UBE2R2Q712K3 238 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 SPATA19Q7Z5L4 167 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TAMM41Q96BW9 452 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 GPATCH1Q9BRR8 931 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ATP13A1Q9HD20 1204 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CRTAC1Q9NQ79 661 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 FBP2O00757 339 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 AKAP3O75969 853 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ALDH2P05091 517 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 MMP10P09238 476 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 IL12BP29460 328 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PSEN1P49768 467 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 NEPROQ6NW34 567 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 GPAT4Q86UL3 456 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 LDHDQ86WU2 507 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TUBA1CQ9BQE3 449 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ZFP14Q9HCL3 533 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 COL15A1P39059 1388 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 C20orf202A1L168 122 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PDLIM1O00151 329 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 HDAC3O15379 428 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 VAPBO95292 243 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 C22orf31O95567 290 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 GNAZP19086 355 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PNLIPRP1P54315 467 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 DCDC5Q6ZRR9 648 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 S100A16Q96FQ6 103 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 TEX13DA0A0J9YY54 714 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 ASLP04424 464 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 OR2B6P58173 313 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 C17orf64Q86WR6 236 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 VRK1Q99986 396 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CDHR5Q9HBB8 845 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms