RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TPM2P07951 284 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 BRAFP15056 766 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 LPOP22079 712 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 EEF1GP26641 437 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 IL1R2P27930 398 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 OTX2P32243 289 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ARCN1P48444 511 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 HCAR3P49019 387 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ACY1Q03154 408 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ATP1A4Q13733 1029 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 LAMB3Q13751 1172 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 GALNT3Q14435 633 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 PLCL1Q15111 1095 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 KRT31Q15323 416 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ANKRD20A8PQ5CZ79 823 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 RALGPS1Q5JS13 557 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ADGRG6Q86SQ4 1221 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 LRRTM4Q86VH4 590 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 SLC38A9Q8NBW4 561 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 GPR26Q8NDV2 337 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 GPR150Q8NGU9 434 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 CCHCR1Q8TD31 782 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ADAMTS17Q8TE56 1095 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 CLIP3Q96DZ5 547 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 CSPG4P5Q96PW8 444 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 TDRD1Q9BXT4 1180 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 POLR1EQ9GZS1 481 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 TRIM39Q9HCM9 518 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 SOHLH2Q9NX45 425 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ITGB1BP2Q9UKP3 347 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 NTNG1Q9Y2I2 539 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 PCDHGB7Q9Y5F8 929 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 COPG1Q9Y678 874 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 ABCA12Q86UK0 2595 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SSU72P8A0A1W2PR75 194 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 TMEM191CA6NGB0 347 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 MASP2O00187 686 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 LCA5LO95447 670 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 PRLP01236 227 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 KLK3P07288 261 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 IDSP22304 550 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 PBLDP30039 288 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SERPINB6P35237 376 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 CLCNKAP51800 687 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 VAV2P52735 878 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 NIPAL4Q0D2K0 466 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 KHDC1Q4VXA5 237 aaKnown RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 DNTTIP2Q5QJE6 756 aaKnown RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SP5Q6BEB4 398 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 TXNRD3NBQ6F5E7 133 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 PLEKHA7Q6IQ23 1121 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 POLNQ7Z5Q5 900 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 MCEMP1Q8IX19 187 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 ZBTB2Q8N680 514 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 GDAP1Q8TB36 358 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 UBXN4Q92575 508 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SGSM3Q96HU1 749 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SLC41A2Q96JW4 573 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 PPM1MQ96MI6 270 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 TLR10Q9BXR5 811 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 KCND1Q9NSA2 647 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 POT1Q9NUX5 634 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 RBM22Q9NW64 420 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 TCFL5Q9UL49 500 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 DNPEPQ9ULA0 475 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 OSGIN2Q9Y236 505 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 WDR37Q9Y2I8 494 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
CCDC171-209ENST00000498725 CFAP20Q9Y6A4 193 aaKnown RBP8.93□□□□□ -0.98
CCDC171-209ENST00000498725 NUP210LQ5VU65 1888 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 PRSS44E7EML9 344 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 MFSD11O43934 449 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 ZG16O60844 167 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 CDK14O94921 469 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 HLA-DQB2P05538 268 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 RARAP10276 462 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 CA4P22748 312 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 CA5AP35218 305 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 GJC1P36383 396 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 CD86P42081 329 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 HALP42357 657 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 SSR1P43307 286 aaKnown RBP8.92□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF165P49910 485 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF135P52742 658 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-209ENST00000498725 RRADP55042 308 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 HSD11B2P80365 405 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 KRT81Q14533 505 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 LLGL1Q15334 1064 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 QPCTQ16769 361 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 PTCHD3Q3KNS1 767 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 LYPLAL1Q5VWZ2 237 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 ABRAXAS1Q6UWZ7 409 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 MED25Q71SY5 747 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 TRAPPC5Q8IUR0 188 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms