RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 RAB42Q8N4Z0 105 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 PAF1Q8N7H5 531 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 USP38Q8NB14 1042 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 C8orf48Q96LL4 319 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 PCGF1Q9BSM1 259 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 PUS3Q9BZE2 481 aaKnown RBP1.73□□□□□ -2.13
SGMS1-205ENST00000498514 GRHPRQ9UBQ7 328 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 MUTYHQ9UIF7 546 aa1.73□□□□□ -2.13
SGMS1-205ENST00000498514 EXO1Q9UQ84 846 aaKnown RBP1.73□□□□□ -2.13
SGMS1-205ENST00000498514 M0QZ24 198 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 WISP2O76076 250 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 SETSIPP0DME0 302 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 HOXC9P31274 260 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 NKX2-1P43699 371 aaPredicted RBP1.72□□□□□ -2.13
SGMS1-205ENST00000498514 PAX8Q06710 450 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 CCDC38Q502W7 563 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 C6orf141Q5SZD1 244 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 WLSQ5T9L3 541 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 FASTKD5Q7L8L6 764 aaKnown RBP1.72□□□□□ -2.13
SGMS1-205ENST00000498514 ATG9AQ7Z3C6 839 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 KCNMB4Q86W47 210 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 ZNF843Q8N446 348 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 NGEFQ8N5V2 710 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.72□□□□□ -2.13
SGMS1-205ENST00000498514 C17orf47Q8NEP4 570 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 PPP4R1Q8TF05 950 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 SUSD6Q92537 303 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 ACOX2Q99424 681 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 KRT12Q99456 494 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 ELAC2Q9BQ52 826 aaKnown RBP1.72□□□□□ -2.13
SGMS1-205ENST00000498514 WWTR1Q9GZV5 400 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 LTB4R2Q9NPC1 389 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 THEGQ9P2T0 379 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 HSPB7Q9UBY9 170 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 A4GNTQ9UNA3 340 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 TRIOBPQ9H2D6 2365 aa1.72□□□□□ -2.13
SGMS1-205ENST00000498514 IGLV9-49A0A0B4J1Y8 123 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 SRRM5B3KS81 715 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 IFNL4K9M1U5 179 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 IDH3BO43837 385 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 KHDRBS3O75525 346 aaKnown RBP1.71□□□□□ -2.14
SGMS1-205ENST00000498514 BMP10O95393 424 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 CLDN1O95832 211 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 URODP06132 367 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 CNPP09543 421 aaKnown RBP1.71□□□□□ -2.14
SGMS1-205ENST00000498514 DRD3P35462 400 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 CDR2Q01850 454 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 POU5F1Q01860 360 aaKnown RBP1.71□□□□□ -2.14
SGMS1-205ENST00000498514 LRMPQ12912 555 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 P2RY6Q15077 328 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 PNLIPRP3Q17RR3 467 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 HLA-BQ31612 363 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 DPPA4Q7L190 304 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 HACE1Q8IYU2 909 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 ZNF383Q8NA42 475 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 OR2T11Q8NH01 316 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 PABPC5Q96DU9 382 aaKnown RBP1.71□□□□□ -2.14
SGMS1-205ENST00000498514 USP28Q96RU2 1077 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 CRB3Q9BUF7 120 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 INTS9Q9NV88 658 aaKnown RBP1.71□□□□□ -2.14
SGMS1-205ENST00000498514 FLRT3Q9NZU0 649 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 NYAP2Q9P242 653 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 YIPF1Q9Y548 306 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 SCINQ9Y6U3 715 aa1.71□□□□□ -2.14
SGMS1-205ENST00000498514 TSPAN3O60637 253 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 C22orf31O95567 290 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 HOXB5P09067 269 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 PIK3R1P27986 724 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 GNAQP50148 359 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 MMP15P51511 669 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 GSCP56915 257 aaPredicted RBP1.7□□□□□ -2.14
SGMS1-205ENST00000498514 GSDMDP57764 484 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 FASTKD3Q14CZ7 662 aaKnown RBP1.7□□□□□ -2.14
SGMS1-205ENST00000498514 E2F5Q15329 346 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 ADCK5Q3MIX3 580 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 LCN10Q6JVE6 187 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 TMEM64Q6YI46 380 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 PTOV1Q86YD1 416 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 PARP8Q8N3A8 854 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 DCLK2Q8N568 766 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 HPSE2Q8WWQ2 592 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 SEMA4DQ92854 862 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 ELP4Q96EB1 424 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 CNOT6LQ96LI5 555 aaKnown RBP1.7□□□□□ -2.14
SGMS1-205ENST00000498514 HARBI1Q96MB7 349 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 GAL3ST4Q96RP7 486 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 TMEM47Q9BQJ4 181 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 GLIS2Q9BZE0 524 aaPredicted RBP1.7□□□□□ -2.14
SGMS1-205ENST00000498514 SIL1Q9H173 461 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 ANAPC11Q9NYG5 84 aa1.7□□□□□ -2.14
SGMS1-205ENST00000498514 OR6C76A6NM76 312 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 B9A039 149 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 USP17L23D6RBM5 183 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 GNALP38405 381 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 MAGEA11P43364 429 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 CTSCP53634 463 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 GPR17Q13304 367 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 MFAP5Q13361 173 aa1.69□□□□□ -2.14
SGMS1-205ENST00000498514 RFTN1Q14699 578 aaPredicted RBP1.69□□□□□ -2.14
SGMS1-205ENST00000498514 DRAP1Q14919 205 aaPredicted RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms