RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 C9orf50Q5SZB4 431 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 FAAH2Q6GMR7 532 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 ZNF280DQ6N043 979 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 BRAT1Q6PJG6 821 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 FOXL2NBQ6ZUU3 175 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 C9orf139Q6ZV77 190 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 TMEM219Q86XT9 240 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 KMT5CQ86Y97 462 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 ARHGAP12Q8IWW6 846 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.81□□□□□ -1.96
RIF1-212ENST00000498041 C1orf87Q8N0U7 546 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 ADSSL1Q8N142 457 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 SRBD1Q8N5C6 995 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 TEX19Q8NA77 164 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 PPHLN1Q8NEY8 458 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 DUSP19Q8WTR2 217 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 DNASE2BQ8WZ79 361 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 HDAC2Q92769 488 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 TAAR8Q969N4 342 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 RHBDF1Q96CC6 855 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 WDFY2Q96P53 400 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 QRFPRQ96P65 431 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 INPP4AQ96PE3 977 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 PDZD7Q9H5P4 517 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 POLR1BQ9H9Y6 1135 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 PLEKHA5Q9HAU0 1116 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 SEBOXQ9HB31 216 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 LRRC4Q9HBW1 653 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 KLHL1Q9NR64 748 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 UBA2Q9UBT2 640 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 OR14J1Q9UGF5 321 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 ADAM18Q9Y3Q7 739 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 PIAS3Q9Y6X2 628 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 TMEM94Q12767 1356 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 SSH2Q76I76 1423 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 LRRC7Q96NW7 1537 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 MED1Q15648 1581 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 NRKQ7Z2Y5 1582 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 COL18A1P39060 1754 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 TRPM3Q9HCF6 1732 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 NWD1Q149M9 1564 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 BLMP54132 1417 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 ANKRD36BQ8N2N9 1353 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 PTPRCP08575 1304 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 A0A1W2PS18 150 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 C1orf226A1L170 272 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 ASPDHA6ND91 283 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 LIPT2A6NK58 231 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 F5H0A9 414 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 BMPR1BO00238 502 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 HS3ST1O14792 307 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 HCRTR2O43614 444 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 DAB1O75553 588 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 RNASEH2AO75792 299 aaKnown RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 HLA-DOBP13765 273 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 MYOD1P15172 320 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 ARL3P36405 182 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 UBA7P41226 1012 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 CLCN3P51790 818 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 RIPK4P57078 832 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 EEF1A1P68104 462 aaKnown RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 TFAP4Q01664 338 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 ACSM2AQ08AH3 577 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 SLC39A6Q13433 755 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 KRT32Q14532 448 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 MED22Q15528 200 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 NAB2Q15742 525 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 MYLK3Q32MK0 819 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 ACCSLQ4AC99 568 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 SOWAHCQ53LP3 525 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 EEF1A1P5Q5VTE0 462 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 HAUS3Q68CZ6 603 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 C18orf63Q68DL7 685 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 TTI2Q6NXR4 508 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 NCEH1Q6PIU2 408 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 GDPD4Q6W3E5 623 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 SEPT14Q6ZU15 432 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 ZNF771Q7L3S4 317 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 RSRC2Q7L4I2 434 aaKnown RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 PXKQ7Z7A4 578 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 GPR180Q86V85 440 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 NRROSQ86YC3 692 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 RNF168Q8IYW5 571 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 MUC20Q8N307 709 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 PDILTQ8N807 584 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 BBS10Q8TAM1 723 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 HMGCLL1Q8TB92 370 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 THAP6Q8TBB0 222 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 DNAAF4Q8WXU2 420 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 POMGNT1Q8WZA1 660 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 PIGTQ969N2 578 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 PCYT2Q99447 389 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 EPYCQ99645 322 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 SEPT5Q99719 369 aaPredicted RBP2.8□□□□□ -1.96
RIF1-212ENST00000498041 SYT17Q9BSW7 474 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 CSTL1Q9H114 145 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 SIL1Q9H173 461 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 MUC13Q9H3R2 512 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 MAGIXQ9H6Y5 334 aa2.8□□□□□ -1.96
RIF1-212ENST00000498041 FKRPQ9H9S5 495 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms