RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 AKT1P31749 480 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 ARSDP51689 593 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CLCNKAP51800 687 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
ERCC8-208ENST00000497892 ACVR1Q04771 509 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 GTF2H3Q13889 308 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TSTD2Q5T7W7 516 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 HES3Q5TGS1 186 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 LYPD8Q6UX82 237 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 NLRP9Q7RTR0 991 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 C11orf96Q7Z7L8 435 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TMPRSS12Q86WS5 348 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TRAPPC5Q8IUR0 188 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 NAGSQ8N159 534 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 PPHLN1Q8NEY8 458 aaKnown RBP11.08□□□□□ -0.64
ERCC8-208ENST00000497892 OR13J1Q8NGT2 312 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CPT1BQ92523 772 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC74AQ96AQ1 378 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 ULK4Q96C45 1275 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CDKN2AIPNLQ96HQ2 116 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TTC25Q96NG3 672 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TIMM29Q9BSF4 260 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 IL22Q9GZX6 179 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CRLS1Q9UJA2 301 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 KCNK6Q9Y257 313 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 SLC30A1Q9Y6M5 507 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 FRYQ5TBA9 3013 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 IGLV3-16A0A075B6K0 115 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC188H7C350 402 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 NUDT21O43809 227 aaKnown RBP11.07□□□□□ -0.64
ERCC8-208ENST00000497892 EML2O95834 649 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PNLIPP16233 465 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 ZNF7P17097 686 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PTGIRP43119 386 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CTSCP53634 463 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 MAZP56270 477 aaKnown RBP11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CLDN6P56747 220 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 SESN2P58004 480 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-208ENST00000497892 B4GALNT1Q00973 533 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CACNG1Q06432 222 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PTK6Q13882 451 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PPP1R7Q15435 360 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 INSCQ1MX18 579 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PLA2G4EQ3MJ16 856 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PCID2Q5JVF3 399 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CDCP2Q5VXM1 449 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 ANKRD22Q5VYY1 191 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 LRRC8BQ6P9F7 803 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 SYT10Q6XYQ8 523 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 MICALCLQ6ZW33 695 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 ZNF438Q7Z4V0 828 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 SFRP1Q8N474 314 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 DCBLD1Q8N8Z6 715 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 MAPK15Q8TD08 544 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 PATE1Q8WXA2 126 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 ZNF514Q96K75 400 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-208ENST00000497892 ZNF778Q96MU6 729 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 COPS8Q99627 209 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC3Q9BQI4 270 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 FAM96AQ9H5X1 160 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 KLC4Q9NSK0 619 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 TBC1D29Q9UFV1 150 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 SLC23A2Q9UGH3 650 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 SLC2A6Q9UGQ3 507 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 RNF215Q9Y6U7 377 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 KNTC1P50748 2209 aa11.07□□□□□ -0.64
ERCC8-208ENST00000497892 WDFY3Q8IZQ1 3526 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 PIKFYVEQ9Y2I7 2098 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC162PA2VCL2 907 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 OR2AG2A6NM03 316 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 PRSS56P0CW18 603 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 RALBP11234 206 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 MLNP12872 115 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 F3P13726 295 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 VCLP18206 1134 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 MSH3P20585 1137 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ACRV1P26436 265 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 MGAT1P26572 445 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CASQ1P31415 396 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 FOXN2P32314 431 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 PAFAH1B1P43034 410 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 FASLGP48023 281 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 NPY2RP49146 381 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CDKN1CP49918 316 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 TERF1P54274 439 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CRADDP78560 199 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SARNPP82979 210 aaKnown RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 DMPKQ09013 629 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 NR1D2Q14995 579 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 BCL7AQ4VC05 210 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ZRANB3Q5FWF4 1079 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 FNBP1LQ5T0N5 605 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ARMC3Q5W041 872 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 AFTPHQ6ULP2 937 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms