RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SYNGR3O43761 229 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 IL7RP16871 459 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 ZNF23P17027 643 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 UBA1P22314 1058 aaKnown RBP5.08□□□□□ -1.6
MDM2-220ENST00000496959 PLIN5Q00G26 463 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 SLC35E4Q6ICL7 350 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 SLC27A1Q6PCB7 646 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 PLEKHM3Q6ZWE6 761 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 NRROSQ86YC3 692 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 SRBD1Q8N5C6 995 aaKnown RBP5.08□□□□□ -1.6
MDM2-220ENST00000496959 ACVR1CQ8NER5 493 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 OR10V1Q8NGI7 309 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 SLC38A5Q8WUX1 472 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 IGSF8Q969P0 613 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 RRNAD1Q96FB5 475 aaKnown RBP5.08□□□□□ -1.6
MDM2-220ENST00000496959 LINGO1Q96FE5 620 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 SCRN2Q96FV2 425 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 ST6GAL2Q96JF0 529 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 F2RL3Q96RI0 385 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 PCDHB16Q9NRJ7 776 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 DDX43Q9NXZ2 648 aaKnown RBP5.08□□□□□ -1.6
MDM2-220ENST00000496959 TAS2R10Q9NYW0 307 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 GJD2Q9UKL4 321 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 MKLN1Q9UL63 735 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 PADI3Q9ULW8 664 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 NAALADL1Q9UQQ1 740 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 CAPN7Q9Y6W3 813 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 RGPD1P0DJD0 1748 aa5.08□□□□□ -1.6
MDM2-220ENST00000496959 CCDC144AA2RUR9 1427 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 RPGRIP1LQ68CZ1 1315 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 KDM3AQ9Y4C1 1321 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 ZCWPW2A0A1B0GU75 182 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 CTAGE9A4FU28 777 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 M0QZ24 198 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 KCNN4O15554 427 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 IGHV4-39P01824 125 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 CTAGE8P0CG41 777 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 EPHA8P29322 1005 aaPredicted RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 UBA7P41226 1012 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 HARS2P49590 506 aaKnown RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 VEGFCP49767 419 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 TUBP50607 506 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 RARSP54136 660 aaKnown RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 ERVK11-1P61568 191 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 TBX2Q13207 712 aaPredicted RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 CXorf66Q5JRM2 361 aaPredicted RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 ACAD10Q6JQN1 1059 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 CTAGE4Q8IX94 777 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 TSPYL6Q8N831 410 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 OR52I2Q8NH67 350 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 OR14L1PQ8NHC6 308 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 FAM76AQ8TAV0 307 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 SMARCE1Q969G3 411 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 PPP1R13BQ96KQ4 1090 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 RBM4Q9BWF3 364 aaKnown RBP5.07□□□□□ -1.6
MDM2-220ENST00000496959 BARHL1Q9BZE3 327 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 TCP11L1Q9NUJ3 509 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 DLGAP2Q9P1A6 1054 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 PDP2Q9P2J9 529 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 MAU2Q9Y6X3 613 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 ADGRB2O60241 1585 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 BRWD3Q6RI45 1802 aa5.07□□□□□ -1.6
MDM2-220ENST00000496959 IFT172Q9UG01 1749 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 METP08581 1390 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 PLCH1Q4KWH8 1693 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 A0A1W2PRG0 241 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 SEC14L2O76054 403 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 CAVIN2O95810 425 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 INHBAP08476 426 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 RNF224P0DH78 156 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 UBL4AP11441 157 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 APOBEC1P41238 236 aaKnown RBP5.06□□□□□ -1.6
MDM2-220ENST00000496959 CLDN20P56880 219 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 RPL24P83731 157 aaKnown RBP5.06□□□□□ -1.6
MDM2-220ENST00000496959 CCNG2Q16589 344 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 CEACAM20Q6UY09 585 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 HEATR4Q86WZ0 1026 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 KLHDC9Q8NEP7 349 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 STAMBPL1Q96FJ0 436 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 SIL1Q9H173 461 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 LRMDAQ9H2I8 198 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 OR14J1Q9UGF5 321 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 PXDNQ92626 1479 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 ABCA3Q99758 1704 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 FMN2Q9NZ56 1722 aa5.06□□□□□ -1.6
MDM2-220ENST00000496959 ANKRD28O15084 1053 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 EIF3DO15371 548 aaKnown RBP eCLIP5.05□□□□□ -1.6
MDM2-220ENST00000496959 NKX2-2O95096 273 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 TUBBP07437 444 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 AHRP35869 848 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 HSD17B4P51659 736 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 TUBB4BP68371 445 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 COG7P83436 770 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 TMEM30BQ3MIR4 351 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 SFMBT2Q5VUG0 894 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 RAD9BQ6WBX8 426 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 SLC44A1Q8WWI5 657 aa5.05□□□□□ -1.6
MDM2-220ENST00000496959 ZUFSPQ96AP4 578 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms