RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 H7C0C1 242 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 POLR1CO15160 346 aaPredicted RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A9O60656 530 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 STK17BO94768 372 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 BRAFP15056 766 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 VCLP18206 1134 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A6P19224 532 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 IDSP22304 550 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A1P22309 533 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A4P22310 534 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 ATP5OP48047 213 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 SEPHS1P49903 392 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 FOXM1Q08050 763 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 TMEM115Q12893 351 aaPredicted RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 SPA17Q15506 151 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 CHRNA6Q15825 494 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UNC5BQ8IZJ1 945 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 KIAA1143Q96AT1 154 aaPredicted RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 C9orf72Q96LT7 481 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 VAT1Q99536 393 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 ZPBPQ9BS86 351 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 C10orf88Q9H8K7 445 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 FBXO8Q9NRD0 319 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 STARD5Q9NSY2 213 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 POT1Q9NUX5 634 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 SIDT1Q9NXL6 827 aaKnown RBP12.73□□□□□ -0.37
FN1-226ENST00000496542 HACD3Q9P035 362 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 IL17CQ9P0M4 197 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 BSNQ9UPA5 3926 aa12.73□□□□□ -0.37
FN1-226ENST00000496542 GLYATL1P3A0A0U1RQE8 302 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 PRR19A6NJB7 356 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 HACD1B0YJ81 288 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 CAPN5O15484 640 aaPredicted RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 RASSF9O75901 435 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 LCA5LO95447 670 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 EPOP01588 193 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 C9P02748 559 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 ANKRD34CP0C6C1 535 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 SFTPCP11686 197 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 MAP4P27816 1152 aaKnown RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 PBLDP30039 288 aaPredicted RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 CAPZBP47756 277 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 LEPRP48357 1165 aaKnown RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 MPP3Q13368 585 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 GPR18Q14330 331 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 AGAP9Q5VTM2 703 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 ZDHHC20Q5W0Z9 365 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 BORAQ6PGQ7 559 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 SARM1Q6SZW1 724 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 ABRAXAS1Q6UWZ7 409 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 TIPARPQ7Z3E1 657 aaKnown RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 RASGEF1AQ8N9B8 481 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 RSC1A1Q92681 617 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 FICDQ9BVA6 458 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 TRIM4Q9C037 500 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
FN1-226ENST00000496542 TRHDEQ9UKU6 1024 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 WDR37Q9Y2I8 494 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
FN1-226ENST00000496542 OR2AG2A6NM03 316 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 NKX2-8O15522 239 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 KIF1CO43896 1103 aaKnown RBP12.71□□□□□ -0.37
FN1-226ENST00000496542 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 DLGAP3O95886 979 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 APOC2P02655 101 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 ITGB6P18564 788 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 RBL1P28749 1068 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 AKT1P31749 480 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 CA5AP35218 305 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 HALP42357 657 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 CTSCP53634 463 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 SH3BP2P78314 561 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 LDLRAP1Q5SW96 308 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 GPRC6AQ5T6X5 926 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 FAM92BQ6ZTR7 304 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 AMZ2Q86W34 360 aa12.71□□□□□ -0.37
FN1-226ENST00000496542 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms