RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SEMA3AQ14563 771 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 LDLRAP1Q5SW96 308 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 NRROSQ86YC3 692 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 PHYKPLQ8IUZ5 450 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 ZNF547Q8IVP9 402 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 ZNF548Q8NEK5 533 aaPredicted RBP11.75□□□□□ -0.53
APTX-233ENST00000496030 CCL4L1Q8NHW4 92 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 RAB17Q9H0T7 212 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 TMEM168Q9H0V1 697 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 OR2AG1Q9H205 316 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 PRORYQ9H606 182 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 ZDHHC18Q9NUE0 388 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 MARCH4Q9P2E8 410 aaPredicted RBP11.75□□□□□ -0.53
APTX-233ENST00000496030 BTBD3Q9Y2F9 522 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 UTP11Q9Y3A2 253 aaKnown RBP11.75□□□□□ -0.53
APTX-233ENST00000496030 PLEKHM1Q9Y4G2 1056 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 KNTC1P50748 2209 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 COL6A6A6NMZ7 2263 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 COL12A1Q99715 3063 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
APTX-233ENST00000496030 PIEZO2Q9H5I5 2752 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 ZFC3H1O60293 1989 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 PRR19A6NJB7 356 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 PYCARD-AS1I3L0S3 204 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 J3QKU1 62 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 TRIM38O00635 465 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 VEGFDO43915 354 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 VAPBO95292 243 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 ASMTLO95671 621 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 TNFP01375 233 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 ITGALP20701 1170 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 CTSCP53634 463 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 FASTKD3Q14CZ7 662 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 DBN1Q16643 649 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 BBS9Q3SYG4 887 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 GLE1Q53GS7 698 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 PRRT3Q5FWE3 981 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 KIAA0930Q6ICG6 404 aaPredicted RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 MARK2Q7KZI7 788 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 C11orf96Q7Z7L8 435 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 SERPINA9Q86WD7 417 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 BBOF1Q8ND07 529 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 OR4L1Q8NH43 312 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 BAHD1Q8TBE0 780 aaPredicted RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 FBXO25Q8TCJ0 367 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 GPBAR1Q8TDU6 330 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 NAT14Q8WUY8 206 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 EBNA1BP2Q99848 306 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 SLC13A1Q9BZW2 595 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 RMI1Q9H9A7 625 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 TRNAU1APQ9NX07 287 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 SPASTQ9UBP0 616 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 APOBEC3BQ9UH17 382 aaKnown RBP11.74□□□□□ -0.53
APTX-233ENST00000496030 PRKAB1Q9Y478 270 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 CSNK1G3Q9Y6M4 447 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 SLC30A1Q9Y6M5 507 aa11.74□□□□□ -0.53
APTX-233ENST00000496030 GPR89AB7ZAQ6 455 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 LMO7DNF2Z398 122 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 YY2O15391 372 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 AQP9O43315 295 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 CDK14O94921 469 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 GPR89BP0CG08 455 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 ACRV1P26436 265 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 ELK3P41970 407 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 GNPDA1P46926 289 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 BLKP51451 505 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 PLTPP55058 493 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 ARL4CP56559 192 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 CTBSQ01459 385 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 GUCY2DQ02846 1103 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 CALCOCO2Q13137 446 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 TCEA2Q15560 299 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 HIF1AQ16665 826 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 DNAJC21Q5F1R6 531 aaKnown RBP11.73□□□□□ -0.53
APTX-233ENST00000496030 HP1BP3Q5SSJ5 553 aaPredicted RBP11.73□□□□□ -0.53
APTX-233ENST00000496030 CASC4Q6P4E1 433 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 AFTPHQ6ULP2 937 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 XKR5Q6UX68 686 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 TAS2R42Q7RTR8 314 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 LDB1Q86U70 411 aaPredicted RBP11.73□□□□□ -0.53
APTX-233ENST00000496030 UNC5BQ8IZJ1 945 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 OR6P1Q8NGX9 317 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 LMX1AQ8TE12 382 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 SETD7Q8WTS6 366 aaKnown RBP11.73□□□□□ -0.53
APTX-233ENST00000496030 ULK4Q96C45 1275 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 OR2M4Q96R27 311 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 BOCQ9BWV1 1114 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 ZDHHC3Q9NYG2 299 aa11.73□□□□□ -0.53
APTX-233ENST00000496030 GULP1Q9UBP9 304 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms