RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZNF7P17097 686 aaPredicted RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 PBLDP30039 288 aaPredicted RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 DPP6P42658 865 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 GNPDA1P46926 289 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 NXPH1P58417 271 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 SRP54P61011 504 aaKnown RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 OVGP1Q12889 678 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 ITIH4Q14624 930 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 TYSND1Q2T9J0 566 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 KIF19Q2TAC6 998 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 PLA2G4EQ3MJ16 856 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 TRIM61Q5EBN2 209 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 CNSTQ6PJW8 725 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 TMEM220Q6QAJ8 160 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 DCP2Q8IU60 420 aaKnown RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 TRAPPC5Q8IUR0 188 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 LMNTD2Q8IXW0 634 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 BEND7Q8N7W2 519 aaPredicted RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 PDXPQ96GD0 296 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 TCF12Q99081 682 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 EDEM2Q9BV94 578 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 EPB41L4BQ9H329 900 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 ACSS3Q9H6R3 686 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 CARS2Q9HA77 564 aaKnown RBP16.97■□□□□ 0.31
LIME1-208ENST00000493265 FAM8A1Q9UBU6 413 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 SUFUQ9UMX1 484 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 GPSM3Q9Y4H4 160 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 SNX11Q9Y5W9 270 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 PRSS21Q9Y6M0 314 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 EXOC1LA0A1B0GW35 172 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 PRSS38A1L453 326 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 CCDC151A5D8V7 595 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 VEGFDO43915 354 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 FAM155BO75949 473 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 RASGRP1O95267 797 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 AHSGP02765 367 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 FUCA1P04066 466 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 ABHD2P08910 425 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 ATP1B2P14415 290 aaPredicted RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 ITGB6P18564 788 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 NSG1P42857 185 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 CTSCP53634 463 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 EIF2B5Q13144 721 aaKnown RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 ALG11Q2TAA5 492 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 RABEPKQ7Z6M1 372 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 CNTN4Q8IWV2 1026 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 CEP76Q8TAP6 659 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 LPGAT1Q92604 370 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 ZBTB9Q96C00 473 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 GPR27Q9NS67 375 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 INTS10Q9NVR2 710 aaKnown RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.31
LIME1-208ENST00000493265 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
LIME1-208ENST00000493265 FRYQ5TBA9 3013 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 IGLV3-16A0A075B6K0 115 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 PRMT5O14744 637 aaPredicted RBP16.95■□□□□ 0.3
LIME1-208ENST00000493265 GRID2O43424 1007 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 NUAK1O60285 661 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 C1QAP02745 245 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 SHBGP04278 402 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 GABRB3P28472 473 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 HOXD12P35452 270 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 LEPRP48357 1165 aaKnown RBP16.95■□□□□ 0.3
LIME1-208ENST00000493265 CD151P48509 253 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 SHC2P98077 582 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 BNC1Q01954 994 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 PPARDQ03181 441 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 KLHL38Q2WGJ6 581 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 KIAA0408Q6ZU52 694 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 CYS1Q717R9 158 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 PARGQ86W56 976 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 SLC26A11Q86WA9 606 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 LRRC6Q86X45 466 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 GALNT13Q8IUC8 556 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 HEXDCQ8WVB3 486 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 FAM136AQ96C01 138 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 NDNQ99608 321 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 CCDC68Q9H2F9 335 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 TCEAL2Q9H3H9 227 aaPredicted RBP16.95■□□□□ 0.3
LIME1-208ENST00000493265 TM7SF3Q9NS93 570 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 VPS18Q9P253 973 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 RALYQ9UKM9 306 aaKnown RBP16.95■□□□□ 0.3
LIME1-208ENST00000493265 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 VPS9D1Q9Y2B5 631 aa16.95■□□□□ 0.3
LIME1-208ENST00000493265 GON4LQ3T8J9 2241 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 IQCF5A8MTL0 148 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 DNAJC6O75061 913 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 TRIM16O95361 564 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 TNFP01375 233 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 OR56A5P0C7T3 313 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 JUNDP17535 347 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 SAT1P21673 171 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 CTSKP43235 329 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms