RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MFSD13AQ14CX5 517 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PGM5Q15124 567 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TSC22D1Q15714 1073 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 SLC36A3Q495N2 470 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TEX44Q53QW1 395 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 C2CD6Q53TS8 623 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 YIF1BQ5BJH7 314 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 C6orf183Q5T699 404 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MLIPQ5VWP3 458 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CARD17Q5XLA6 110 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CDC73Q6P1J9 531 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TMIGD1Q6UXZ0 262 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RNF44Q7L0R7 432 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 KCTD20Q7Z5Y7 419 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ADAMTSL2Q86TH1 951 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF410Q86VK4 478 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 IQCHQ86VS3 1027 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CYP4Z1Q86W10 505 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FAM129CQ86XR2 697 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ARID3BQ8IVW6 561 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC8AQ8IWT6 810 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CLYBLQ8N0X4 340 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 BATF2Q8N1L9 274 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 VGLL2Q8N8G2 317 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PPFIBP2Q8ND30 876 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PSD4Q8NDX1 1056 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ADCY4Q8NFM4 1077 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 GPBAR1Q8TDU6 330 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF473Q8WTR7 871 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MRGPRFQ96AM1 343 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 DACT3Q96B18 629 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 C3orf49Q96BT1 292 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 NMD3Q96D46 503 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 DTD2Q96FN9 168 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 WDFY2Q96P53 400 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 KLHL5Q96PQ7 755 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CCNL2Q96S94 520 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 GAD1Q99259 594 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ASCL2Q99929 193 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MXRA8Q9BRK3 442 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 NUP58Q9BVL2 599 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 IDI2Q9BXS1 227 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 NLNQ9BYT8 704 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ANO3Q9BYT9 981 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PRRG3Q9BZD7 231 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 OPN3Q9H1Y3 402 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 OR51B5Q9H339 312 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TP63Q9H3D4 680 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PRDM12Q9H4Q4 367 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF576Q9H609 170 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RIOX1Q9H6W3 641 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 METTL8Q9H825 291 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 SEMA4BQ9NPR2 832 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 DIABLOQ9NR28 239 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 DNAJC17Q9NVM6 304 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FAM118AQ9NWS6 357 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 WSB2Q9NYS7 404 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 SLC25A10Q9UBX3 287 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 KLHL3Q9UH77 587 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CLEC2DQ9UHP7 191 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 KCNH3Q9ULD8 1083 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FAF1Q9UNN5 650 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 EIF3LQ9Y262 564 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PADI2Q9Y2J8 665 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF451Q9Y4E5 1061 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 HEY1Q9Y5J3 304 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 AOX1Q06278 1338 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 A0A1W2PRG0 241 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 KANSL1LA0AUZ9 987 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 C1QTNF9BB2RNN3 333 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TRIM77I1YAP6 450 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PIK3R2O00459 728 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MEIS1O00470 390 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MDM4O15151 490 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CHADO15335 359 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CTIFO43310 598 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PPIP5K2O43314 1243 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MSCO60682 206 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PFDN1O60925 122 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SCN2BO60939 215 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 GPC4O75487 556 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 RPS6KA5O75582 802 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SUN1O94901 812 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CXCL14O95715 111 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MBP02144 154 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 KRT6AP02538 564 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SCG5P05408 212 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 THBS1P07996 1170 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 HMBSP08397 361 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 KRT19P08727 400 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 STSP08842 583 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 GNAO1P09471 354 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 OR4E1P0C645 316 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 UBTFL1P0CB47 393 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SLC2A3P11169 496 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PEPDP12955 493 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CCL2P13500 99 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 NQO2P16083 231 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF10P21506 573 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms