RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GYPCP04921 128 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CCNYL3P0C7X3 344 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 AMD1P17707 334 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 SLC19A1P41440 591 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 MAPK9P45984 424 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CAPZBP47756 277 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 NAP1L1P55209 391 aaKnown RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TAS2R40P59535 323 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 NFKB2Q00653 900 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 GABPB1Q06547 395 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 DMPKQ09013 629 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 KLRB1Q12918 225 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ZBTB17Q13105 803 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TRIM14Q14142 442 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TCEAL1Q15170 157 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 INSCQ1MX18 579 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ASTE1Q2TB18 679 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TEX44Q53QW1 395 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 COLEC12Q5KU26 742 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TCTN3Q6NUS6 607 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CAVIN1Q6NZI2 390 aaKnown RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CLEC18BQ6UXF7 455 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 KMT5CQ86Y97 462 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 RHOT2Q8IXI1 618 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CARFQ8N187 725 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CLEC18CQ8NCF0 446 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 OR8K1Q8NGG5 319 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CPLX3Q8WVH0 158 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 RAPGEF5Q92565 580 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 UBXN4Q92575 508 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ABHD17AQ96GS6 310 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 SCYL1Q96KG9 808 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 OLFM3Q96PB7 478 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TBC1D10AQ9BXI6 508 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 GPR63Q9BZJ6 419 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ULBP3Q9BZM4 244 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 TRIM4Q9C037 500 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ZCCHC2Q9C0B9 1178 aaKnown RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 EPN3Q9H201 632 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 APMAPQ9HDC9 416 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 PDE7BQ9NP56 450 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ZNHIT6Q9NWK9 470 aaKnown RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 DDX56Q9NY93 547 aaKnown RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 OGFRQ9NZT2 677 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 HACD3Q9P035 362 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF624Q9P2J8 865 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 SLC23A2Q9UGH3 650 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 PADI1Q9ULC6 663 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF711Q9Y462 761 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 SDK2Q58EX2 2172 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 LOC285095A0A1B0GVY8 99 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 LRRD1A4D1F6 860 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 PDZK1P1A8MUH7 402 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 MKRN2OSH3BPM6 223 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 PYCARD-AS1I3L0S3 204 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 KIF5CO60282 957 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 PYGMP11217 842 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 BPIP17213 487 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 NAT1P18440 290 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 NELFEP18615 380 aaKnown RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 OAS2P29728 719 aaKnown RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 CASP14P31944 242 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 HALP42357 657 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 CD97P48960 835 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 SRSF1Q07955 248 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 FOXM1Q08050 763 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 AP1B1Q10567 949 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 TMEM115Q12893 351 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 IFT88Q13099 833 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 GTF2H3Q13889 308 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 TFDP2Q14188 446 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 GALNT3Q14435 633 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 DEFB109BQ30KR1 87 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 LACTB2Q53H82 288 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 LDLRAP1Q5SW96 308 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 C11orf96Q7Z7L8 435 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 LUZP1Q86V48 1076 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 PPP1R3BQ86XI6 285 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF547Q8IVP9 402 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 APLFQ8IW19 511 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 BEND7Q8N7W2 519 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 PMM1Q92871 262 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 CXorf40BQ96DE9 158 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 SLC41A2Q96JW4 573 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF514Q96K75 400 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 TEKT5Q96M29 485 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 CD180Q99467 661 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 VAT1Q99536 393 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 DNAJC7Q99615 494 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 GPR87Q9BY21 358 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 OSGEPL1Q9H4B0 414 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 GLOD4Q9HC38 313 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 SCHIP1Q9P0W5 487 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-212ENST00000492407 INTUQ9ULD6 942 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 POLHQ9Y253 713 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 HEY1Q9Y5J3 304 aa8.97□□□□□ -0.97
HDAC3-212ENST00000492407 KCNMB2Q9Y691 235 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms