RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 ASB8Q9H765 288 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 PKP3Q9Y446 797 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 POLR3HQ9Y535 204 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 TCRBV3S1A0A5B6 114 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 ARPC2O15144 300 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 INPP4BO15327 924 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 COL6A1P12109 1028 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 CDH15P55291 814 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 MTPNP58546 118 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 IKBKEQ14164 716 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 GRM2Q14416 872 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 Q6ZSR9 355 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 MARVELD2Q8N4S9 558 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 PCYOX1LQ8NBM8 494 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 CLHC1Q8NHS4 586 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 METTL6Q8TCB7 284 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 PEX13Q92968 403 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 PPM1MQ96MI6 270 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 SEPHS2Q99611 448 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 GPATCH1Q9BRR8 931 aaKnown RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 TMEM175Q9BSA9 504 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 POPDC3Q9HBV1 291 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 RNF11Q9Y3C5 154 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 GIPC1O14908 333 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SEC24DO94855 1032 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ESRRBO95718 433 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 TFAP2AP05549 437 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 GABRR2P28476 465 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ACADVLP49748 655 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ATP6V0D1P61421 351 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 HMGCS1Q01581 520 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PLOD1Q02809 727 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-220ENST00000492280 TLE2Q04725 743 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PTGR1Q14914 329 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 NADK2Q4G0N4 442 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PYCR3Q53H96 274 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SBSNQ6UWP8 590 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 OR4F6Q8NGB9 312 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 OR2T34Q8NGX1 318 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 OR2T3Q8NH03 318 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 C2orf15Q8WU43 125 aaKnown RBP12.29□□□□□ -0.44
HMGN1-220ENST00000492280 MTFMTQ96DP5 389 aaKnown RBP12.29□□□□□ -0.44
HMGN1-220ENST00000492280 EGFL8Q99944 293 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 TRIM4Q9C037 500 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ZFP14Q9HCL3 533 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SLC52A3Q9NQ40 469 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ELOVL2Q9NXB9 296 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 CIDEBQ9UHD4 219 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 OBSL1O75147 1896 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 A0A1B0GVG6 124 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SYCE1LA8MT33 242 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 GREM1O60565 184 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ABLIM3O94929 683 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 B3GALT4O96024 378 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 KCNK10P57789 538 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 NR6A1Q15406 480 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 C6orf136Q5SQH8 315 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 DET1Q7L5Y6 550 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 GOLGA7Q7Z5G4 137 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PIH1D2Q8WWB5 315 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 STON2Q8WXE9 905 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 TRAPPC9Q96Q05 1148 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 TMEM79Q9BSE2 394 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 BCAP29Q9UHQ4 241 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
HMGN1-220ENST00000492280 PRMT5O14744 637 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 DENRO43583 198 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 MTX2O75431 263 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SOD2P04179 222 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 G6PDP11413 515 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 HNF1BP35680 557 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 GSK3BP49841 420 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SMARCB1Q12824 385 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 LAMB3Q13751 1172 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 RBM44Q6ZP01 1051 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 GAREM2Q75VX8 874 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CBR4Q8N4T8 237 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CDK5RAP1Q96SZ6 601 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 RNF208Q9H0X6 261 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 IL26Q9NPH9 171 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CFAP97Q9P2B7 532 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 OR51B4Q9Y5P0 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms